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Plant Transcription
Factor Database
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Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
Thhalv10020543m |
| Common Name | EUTSA_v10020543mg |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Eutremeae; Eutrema
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| Family |
GRAS |
| Protein Properties |
Length: 508aa MW: 56872.1 Da PI: 5.024 |
| Description |
GRAS family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Thhalv10020543m | genome | JGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | GRAS | 264.8 | 2.9e-81 | 145 | 507 | 2 | 374 |
GRAS 2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfsh 95
++lL cA a+++++ +++q++L+ lselas++gd+++Rla + ++AL+++++ +s++ ++++ +++ ++ + l f+evsP++ + +
Thhalv10020543m 145 EQLLNPCALAITARNSSRVQHYLCVLSELASSSGDANHRLAVFGLQALQHHIST-SSSVTSSVTFASAE---VKMFQKTLLKFYEVSPWFALPN 234
689**************************************************9.44444444444443...4444444444************ PP
GRAS 96 ltaNqaIleavege....ervHiiDfdisqGlQWpaLlqaLasRp.egppslRiTgvgspesg....skeeleetgerLakfAeelgvpfefnv 180
+aN+aIl+ ++++ + +Hi+D+++s+G+QWp+Ll+aL +Rp ++pp++RiT v++ +++ ++g++L fA++l++++++nv
Thhalv10020543m 235 NMANSAILQILAQDprdkKDLHILDIGVSHGMQWPTLLEALCCRPeGPPPRVRITIVSHLTADipfsVGPPDYNYGSQLIGFARSLNINLQINV 328
************998877889************************55667*********999999877778899*******************9 PP
GRAS 181 lvakrledleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadh.nsesFlerflealeyysalfdslea 273
+ +++ +l +++++E+++V+ +++lh+l +++ + + +e L+++++l+Pk vv++e + ++ +s++F+++f+++ley ++++ds++
Thhalv10020543m 329 V--DKFLQL----SDTSSHETVIVCAQFRLHQLKQSTPDEK---SEALRALRNLKPKGVVLCEYNGEYsSSGDFAAGFARKLEYLWKFLDSTSY 413
6..433333....36788***************95555555...5***********************9999*********************9 PP
GRAS 274 klpreseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvk.sdgyrveeesgslvlgWkdrp 366
++ +e+++ Er+l++ e+ +v++ +g++ +e + W er+++aGF + +++e+a + ak+llrk++ +++ r+e+e+ + l Wk+++
Thhalv10020543m 414 GF----KEESSEERKLMEGEAAKVLMSSGEM----NEGKDIWYERMRKAGFAAEAFGEDAIDGAKSLLRKYDsNWELRMEDEDTFAGLLWKGEA 499
97....7777788999999***********9....9************************************888899999999999******* PP
GRAS 367 LvsvSaWr 374
+ ++S W+
Thhalv10020543m 500 VSFCSLWK 507
*******8 PP
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| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0042446 | Biological Process | hormone biosynthetic process |
| GO:2000032 | Biological Process | regulation of secondary shoot formation |
| Sequence ? help Back to Top |
| Protein Sequence Length: 508 aa
Download sequence Send
to blast |
MSLEETEPPN QTLDQVLGWL EDSMSLTPLP EFDDSYLLHE FDGSQTWEWD QAQDPGYDFI 60
HSYSQDLSAL MGCEATNLEV VTGAPVISSD PPPVFHQPNE QSMKRNHDGL IDDQLVKRSA 120
RSKRKAKKSS EMSCKDGNKE KRWAEQLLNP CALAITARNS SRVQHYLCVL SELASSSGDA 180
NHRLAVFGLQ ALQHHISTSS SVTSSVTFAS AEVKMFQKTL LKFYEVSPWF ALPNNMANSA 240
ILQILAQDPR DKKDLHILDI GVSHGMQWPT LLEALCCRPE GPPPRVRITI VSHLTADIPF 300
SVGPPDYNYG SQLIGFARSL NINLQINVVD KFLQLSDTSS HETVIVCAQF RLHQLKQSTP 360
DEKSEALRAL RNLKPKGVVL CEYNGEYSSS GDFAAGFARK LEYLWKFLDS TSYGFKEESS 420
EERKLMEGEA AKVLMSSGEM NEGKDIWYER MRKAGFAAEA FGEDAIDGAK SLLRKYDSNW 480
ELRMEDEDTF AGLLWKGEAV SFCSLWK*
|
| Functional Description ? help
Back to Top |
| Source |
Description |
| UniProt | Probable transcription factor involved in plant development. {ECO:0000250}. |
