PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Thhalv10018737m
Common NameEUTSA_v10018737mg
Organism
Eutrema salsugineum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Eutremeae; Eutrema
Family G2-like
Protein Properties Length: 372aa    MW: 41359.3 Da    PI: 7.6284
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Thhalv10018737mgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like101.55.4e-32224279156
          G2-like   1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRla 56 
                      k+r++W+peLH+rF++a++qLGGs++AtPk+i+++mkv+gLt+++vkSHLQkYRl+
  Thhalv10018737m 224 KQRRCWSPELHRRFLHALQQLGGSHVATPKQIRDHMKVDGLTNDEVKSHLQKYRLH 279
                      79****************************************************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF466899.86E-18221282IPR009057Homeodomain-like
PROSITE profilePS5129415.086221281IPR017930Myb domain
Gene3DG3DSA:1.10.10.607.1E-28222282IPR009057Homeodomain-like
TIGRFAMsTIGR015571.4E-26224279IPR006447Myb domain, plants
PfamPF002496.0E-8226277IPR001005SANT/Myb domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0009737Biological Processresponse to abscisic acid
GO:0055062Biological Processphosphate ion homeostasis
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 372 aa     Download sequence    Send to blast
MMVHKMETDH AQKMQRCHEY VEALEEEQKK ILVFQRELPL CLELVTKTIE AYRKELSGTS  60
SEQIHGQSDC SEQTTSFCGG PVLEEFIPIK KSSLSQEEED GEHESLEPEI NNVDKKKSDW  120
LRSVQLWNNP SPDLNPIEVS DSERVVAKKA KVVEVKPNNG GAFQPFRKEK KRVFLETQPP  180
QPAVKAATTT SSTTETTGGG KSDSVKAREE QMKQDQSQSQ THRKQRRCWS PELHRRFLHA  240
LQQLGGSHVA TPKQIRDHMK VDGLTNDEVK SHLQKYRLHT RRPATSVTAQ SNGNSQQPQF  300
VVVGGIWVPS PQDYPPPSDV YAPVAEVQPP PLPLPPQSPK LSVERSSGRC NSPAASSSTN  360
TTTTSSASPV S*
Functional Description ? help Back to Top
Source Description
UniProtProbable transcription factor involved in phosphate homeostasis. Involved in the regulation of the developmental response of lateral roots, acquisition and/or mobilization of phosphate and expression of a subset of genes involved in phosphate sensing and signaling pathway. Is a target of the transcription factor PHR1. {ECO:0000269|PubMed:27016098}.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00218DAPTransfer from AT1G68670Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapThhalv10018737m
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: Induced under phosphate deprivation conditions. {ECO:0000269|PubMed:27016098}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_006391112.10.0transcription factor HHO2
SwissprotQ8VZS31e-148HHO2_ARATH; Transcription factor HHO2
TrEMBLV4KM610.0V4KM61_EUTSA; Uncharacterized protein
STRINGXP_006391112.10.0(Eutrema salsugineum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM34912863
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68670.11e-131G2-like family protein
Publications ? help Back to Top
  1. Nagarajan VK,Satheesh V,Poling MD,Raghothama KG,Jain A
    Arabidopsis MYB-Related HHO2 Exerts a Regulatory Influence on a Subset of Root Traits and Genes Governing Phosphate Homeostasis.
    Plant Cell Physiol., 2016. 57(6): p. 1142-52
    [PMID:27016098]
  2. Sun X, et al.
    The GARP/MYB-related grape transcription factor AQUILO improves cold tolerance and promotes the accumulation of raffinose family oligosaccharides.
    J. Exp. Bot., 2018. 69(7): p. 1749-1764
    [PMID:29385617]