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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Thhalv10017050m |
Common Name | EUTSA_v10017050mg |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Eutremeae; Eutrema
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Family |
bZIP |
Protein Properties |
Length: 282aa MW: 31754.7 Da PI: 8.2686 |
Description |
bZIP family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Thhalv10017050m | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | bZIP_1 | 52.9 | 7.9e-17 | 211 | 259 | 5 | 54 |
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkk 54
+r++r++kNRe+A rsR+RK+a++ eLe kv +Le+eN++L+ +l+e +k
Thhalv10017050m 211 RRQKRMIKNRESAARSRARKQAYTHELEIKVSSLEEENEKLR-RLKEVEK 259
79***************************************9.8877776 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0005634 | Cellular Component | nucleus |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 282 aa
Download sequence Send
to blast |
MGSLRGNVEE PISQSLPRQN SLYSLKLHEV QNHLGSSAKP LGSMNLDELL KSVWSAEANQ 60 PPEATEEGIS RQGSLTLPRD LSKKTVDEVW RDIQQDNNGS SHGERRDSNN KQPTLGEITL 120 EDLLLKAGVV TETLVPQNVV SIASNGQWVQ YHQPQHQHHH QGFMPYPVCE MQEMVSPTSL 180 MMGGLSDTQQ AHGRKRVASS GGEFVEKTVE RRQKRMIKNR ESAARSRARK QAYTHELEIK 240 VSSLEEENEK LRRLKEVEKI LPNEPPPDPK WKLRRTSSAC F*
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Functional Description ? help
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Source |
Description |
UniProt | Binds to the embryo specification element and the ABA-responsive element (ABRE) of the Dc3 gene promoter and to the ABRE of the Em1 gene promoter. Could participate in abscisic acid-regulated gene expression during seed development. |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AF334209 | 1e-105 | AF334209.1 Arabidopsis thaliana bZIP protein DPBF4 mRNA, complete cds. |
GenBank | AJ420881 | 1e-105 | AJ420881.1 Arabidopsis thaliana partial mRNA for basic leucine zipper transcription factor (atbzip12 gene). |
GenBank | AK118113 | 1e-105 | AK118113.1 Arabidopsis thaliana At2g41070 mRNA for putative bZIP transcription factor AtbZIP12 / DPBF4, complete cds, clone: RAFL19-38-L08. |
GenBank | AY084668 | 1e-105 | AY084668.1 Arabidopsis thaliana clone 114632 mRNA, complete sequence. |
GenBank | BT025175 | 1e-105 | BT025175.1 Arabidopsis thaliana At2g41070 mRNA, complete cds. |