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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Thhalv10016790m |
Common Name | EUTSA_v10016790mg |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Eutremeae; Eutrema
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Family |
bZIP |
Protein Properties |
Length: 385aa MW: 42804.4 Da PI: 6.5166 |
Description |
bZIP family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Thhalv10016790m | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | bZIP_1 | 32.9 | 1.4e-10 | 197 | 255 | 5 | 63 |
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63
kr++r NR +A rs +RK +i eLe+kv++L++e ++L +l l+ l+ e+
Thhalv10016790m 197 KRAKRIWANRQSAARSKERKTRYIFELERKVQTLQTEATTLSAQLTLLQRDTNGLTVEN 255
9********************************************99998887777665 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0005634 | Cellular Component | nucleus |
GO:0005829 | Cellular Component | cytosol |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 385 aa
Download sequence Send
to blast |
MDKEKSPAPC GGLPPPSPSG RCSAFSDAGH GPDTNRLSHD ISRMLDNPPK KIGHRRAHSE 60 ILTLPDDLSF DSDLGVVGTN ADGASFSDDT EEDLLSIYLD MDKFNSSATS SAQVGEPSGT 120 SWKNESKMHT GSTSNPQNTL NSFGERPRVR HQHSQSMDGS MNINEMLMSG NEDDSTVDAK 180 KSMSAAKLAE LALIDPKRAK RIWANRQSAA RSKERKTRYI FELERKVQTL QTEATTLSAQ 240 LTLLQRDTNG LTVENNELKL RLQTMEQQVH LQDELNEALK EEIQHLKVLT GQAAPNGASA 300 MNYGSLGSNQ QFYSNNQSMQ TILAAQQFQQ LQIHSQKQLQ HQQQFQLQQQ QLQQLLNHRL 360 QQQEQQNGIA EMRKQKPSQG QNES*
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Functional Description ? help
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Source |
Description |
UniProt | Putative transcription factor with an activatory role. |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AK353283 | 0.0 | AK353283.1 Thellungiella halophila mRNA, complete cds, clone: RTFL01-24-D07. |