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Plant Transcription
Factor Database
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Transcription Factor Information
|
Basic
Information? help
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| TF ID |
Thhalv10016733m |
| Common Name | EUTSA_v10016733mg |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Eutremeae; Eutrema
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| Family |
G2-like |
| Protein Properties |
Length: 410aa MW: 46396.8 Da PI: 7.3563 |
| Description |
G2-like family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Thhalv10016733m | genome | JGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | G2-like | 100.7 | 9.3e-32 | 87 | 140 | 2 | 55 |
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55
prlrWtpeLH +F++ave+LGG+++AtPk +l+lm+vkgL+++hvkSHLQ+YR+
Thhalv10016733m 87 PRLRWTPELHLCFLQAVERLGGPDRATPKLVLQLMNVKGLSIAHVKSHLQMYRS 140
8****************************************************7 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 410 aa
Download sequence Send
to blast |
MRSSSQNSEN SKTCPSTNFK ATTKKVEDKD EEDDEEEEED EEERSGDQSP SSNSYVEESG 60
SHHHHNHHDQ IKKNGGSVRP YNRSKTPRLR WTPELHLCFL QAVERLGGPD RATPKLVLQL 120
MNVKGLSIAH VKSHLQMYRS KKTDDPNQGD QGFSFGEGAG YTYNLSQLPM LQSFDQRPST 180
SLGYGSGSWT DHRRQIYRSP WRGLTARDNT RTRQTFFGSQ PGERFHGVSN SILDDKNKTI 240
SFRINSHEAA HENNGVAEAF PKIQRTFLEG MKTFNKSWGQ SLSSNPNSST ATRPQDHYAT 300
TLNSYQRDNP RVAEVSENVL KRKRLVLSDD CNKVDQDLDL SLSLKVPRIH DNLGGCLLED 360
DRKEHDDHED SKVLSLSLSS SSLSKLDRTT RKEDHNDHKK RDFGLGKSP*
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| 3D Structure ? help Back to Top |
 |
| PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
| 6j4r_A | 2e-17 | 88 | 142 | 3 | 57 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j4r_B | 2e-17 | 88 | 142 | 3 | 57 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j4r_C | 2e-17 | 88 | 142 | 3 | 57 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j4r_D | 2e-17 | 88 | 142 | 3 | 57 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| Search in ModeBase |
| Annotation --
Nucleotide ? help
Back to Top |
| Source |
Hit ID |
E-value |
Description |
| GenBank | AC007020 | 0.0 | AC007020.5 Arabidopsis thaliana chromosome 2 clone T3G21 map g4514, complete sequence. |
| GenBank | AF085279 | 0.0 | AF085279.1 Arabidopsis thaliana ABA-regulated gene cluster, complete sequence. |
| GenBank | CP002685 | 0.0 | CP002685.1 Arabidopsis thaliana chromosome 2, complete sequence. |
