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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Thhalv10015975m |
Common Name | EUTSA_v10015975mg |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Eutremeae; Eutrema
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Family |
bZIP |
Protein Properties |
Length: 307aa MW: 34503 Da PI: 9.5832 |
Description |
bZIP family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Thhalv10015975m | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | bZIP_1 | 31 | 5.7e-10 | 24 | 62 | 7 | 45 |
HHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
bZIP_1 7 errkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaL 45
rr+++NReAAr+sR+RKka++++Le+ +L++ ++L
Thhalv10015975m 24 LRRLAQNREAARKSRLRKKAYVQQLENSRLKLTQLEQEL 62
59************************9877777766555 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 307 aa
Download sequence Send
to blast |
MGDISPRTSF STDGETDHNN IMTLRRLAQN REAARKSRLR KKAYVQQLEN SRLKLTQLEQ 60 ELQRARQQGV FISSSGDQAH STAGNGAMAF DVEYRRWQED KNRKMKELSS ALDAHASDAE 120 LRLIVDAVIA HYEELFRIKS NAAKNDVFHL LSGMWKTPAE RCFLWLGGFR SSEILKLIAN 180 KLELLTEQQS QELNNLQESS QQAEDAMSQG MDNLQQSLSD SLSSGTLGSS SSGNVASYMG 240 QMAMAMGKLG TLEGFIRQAD NLRLQTYQQM LRILTTRQSA RALLAIHDYS LRLRALSSLW 300 LARPRE*
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Functional Description ? help
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Source |
Description |
UniProt | Transcriptional activator that binds specifically to the DNA sequence 5'-TGACG-3'. Recognizes ocs elements like the as-1 motif of the cauliflower mosaic virus 35S promoter. Binding to the as-1-like cis elements mediate auxin- and salicylic acid-inducible transcription. May be involved in the induction of the systemic acquired resistance (SAR) via its interaction with NPR1. Could also bind to the Hex-motif (5'-TGACGTGG-3') another cis-acting element found in plant histone promoters. |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AY058830 | 0.0 | AY058830.1 Arabidopsis thaliana AT5g06960/MOJ9_13 mRNA, complete cds. |
GenBank | AY143864 | 0.0 | AY143864.1 Arabidopsis thaliana At5g06960/MOJ9_13 mRNA, complete cds. |
Publications
? help Back to Top |
- Heyndrickx KS,Vandepoele K
Systematic identification of functional plant modules through the integration of complementary data sources. Plant Physiol., 2012. 159(3): p. 884-901 [PMID:22589469] - Ding Y, et al.
Four distinct types of dehydration stress memory genes in Arabidopsis thaliana. BMC Plant Biol., 2013. 13: p. 229 [PMID:24377444] - Zander M,Thurow C,Gatz C
TGA Transcription Factors Activate the Salicylic Acid-Suppressible Branch of the Ethylene-Induced Defense Program by Regulating ORA59 Expression. Plant Physiol., 2014. 165(4): p. 1671-1683 [PMID:24989234] - Walper E,Weiste C,Mueller MJ,Hamberg M,Dröge-Laser W
Screen Identifying Arabidopsis Transcription Factors Involved in the Response to 9-Lipoxygenase-Derived Oxylipins. PLoS ONE, 2016. 11(4): p. e0153216 [PMID:27073862] - Huang LJ, et al.
Ectopically expressed glutaredoxin ROXY19 negatively regulates the detoxification pathway in Arabidopsis thaliana. BMC Plant Biol., 2016. 16(1): p. 200 [PMID:27624344]
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