PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Thhalv10014174m | ||||||||
Common Name | EUTSA_v10013785mg | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Eutremeae; Eutrema
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Family | NAC | ||||||||
Protein Properties | Length: 311aa MW: 35189.5 Da PI: 4.8357 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 155.2 | 2.8e-48 | 6 | 134 | 1 | 129 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k.kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkev 92 l+pGfrFhPtd elv +yLk+kv gkkl + ++i+e+diyk+eP+dLp k +++++ +w+fF++r+kkyatg r+nrat+ gyWk+tgk+++v Thhalv10014174m 6 LAPGFRFHPTDVELVRYYLKRKVMGKKLLV-DAIAELDIYKFEPSDLPdKsYIRSGDLKWHFFCPREKKYATGVRANRATECGYWKTTGKERPV 98 579************************999.89**************96346777888************************************ PP NAM 93 lskkgelvglkktLvfykgrapkgektdWvmheyrle 129 l+ + e+vg ktLv++ g++p+ge+tdWvmheyrle Thhalv10014174m 99 LC-NAEVVGKIKTLVYHFGKSPRGERTDWVMHEYRLE 134 **.999*****************************85 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF101941 | 9.15E-57 | 3 | 156 | IPR003441 | NAC domain |
PROSITE profile | PS51005 | 52.437 | 6 | 156 | IPR003441 | NAC domain |
Pfam | PF02365 | 3.2E-26 | 8 | 133 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 311 aa Download sequence Send to blast |
MGKTQLAPGF RFHPTDVELV RYYLKRKVMG KKLLVDAIAE LDIYKFEPSD LPDKSYIRSG 60 DLKWHFFCPR EKKYATGVRA NRATECGYWK TTGKERPVLC NAEVVGKIKT LVYHFGKSPR 120 GERTDWVMHE YRLEDKVLTQ KNVPQDTYVL CVLFKKDGPG PRNGAQYGAP FKEEDWSDEE 180 QHTDVPAINN PANLDVPNNE TCLVVGSSHD ANKDCFGGMI SESCVSDFLP ATTTTTTCEV 240 PHPNDAANTP MSAAPLFDFN STASLEQTLQ APNNDDDIYS MLDLFVDEDE YLRFSEPNNN 300 EVDFWHSFLF * |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
3ulx_A | 7e-45 | 6 | 156 | 15 | 168 | Stress-induced transcription factor NAC1 |
Search in ModeBase |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcriptional regulator that binds specific DNA sequences on the promoter regions of target genes. {ECO:0000250|UniProtKB:Q9C8W9}. |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Thhalv10014174m |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_006399407.1 | 0.0 | NAC domain-containing protein 82 | ||||
Refseq | XP_006399408.1 | 0.0 | NAC domain-containing protein 82 | ||||
Refseq | XP_006399409.1 | 0.0 | NAC domain-containing protein 82 | ||||
Swissprot | Q9FY82 | 1e-177 | NAC82_ARATH; NAC domain-containing protein 82 | ||||
TrEMBL | V4LM03 | 0.0 | V4LM03_EUTSA; Uncharacterized protein | ||||
STRING | XP_006399407.1 | 0.0 | (Eutrema salsugineum) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G09330.4 | 1e-176 | NAC domain containing protein 82 |
Link Out ? help Back to Top | |
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Phytozome | Thhalv10014174m |
Entrez Gene | 18019449 |
Publications ? help Back to Top | |||
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