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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Thhalv10013890m |
Common Name | EUTSA_v10013890mg |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Eutremeae; Eutrema
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Family |
bZIP |
Protein Properties |
Length: 366aa MW: 41743.2 Da PI: 8.1371 |
Description |
bZIP family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Thhalv10013890m | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | bZIP_1 | 37.2 | 6.4e-12 | 79 | 115 | 3 | 39 |
XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
bZIP_1 3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLe 39
++k++rr+++NReAAr+sR+RKka++++Le+ +L
Thhalv10013890m 79 PDKVQRRLAQNREAARKSRLRKKAYVQQLETSRLKLI 115
68****************************8655554 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0009409 | Biological Process | response to cold |
GO:0042742 | Biological Process | defense response to bacterium |
GO:0005634 | Cellular Component | nucleus |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 366 aa
Download sequence Send
to blast |
MNTTSTHFVT PRRFEIYEPL NQIGMWEESF KNNGGMYTPN SIIIPTNEKP DSLSEDTSHG 60 TEGTTPHKFD QEASTSRHPD KVQRRLAQNR EAARKSRLRK KAYVQQLETS RLKLIQLEQE 120 LDRARQQGFY VGNGVDTNAL GFSDNISSGI VAFEMEYGHW VEEQNRQISE LRTVLHGQVS 180 DVELRSLVET AMKHYVQLFR MKSAAAKIDV FYIMSGMWKT SAERFFLWIG GFRPSELLKV 240 LLPHFDPLTD QQVLNVCNLR KSCQQAEDAV SQGMEKLQHT LTESVAAGKL GEGSYIPQIT 300 CAMERLEALV SFVNHADHLR HETLQQMHRI LTTRQAARGL LALGEYFQRL RALSSSWATR 360 QREPT*
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Functional Description ? help
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Source |
Description |
UniProt | Transcriptional activator that binds specifically to the DNA sequence 5'-TGACG-3'. Recognizes ocs elements like the as-1 motif of the cauliflower mosaic virus 35S promoter. Binding to the as-1-like cis elements mediate auxin- and salicylic acid-inducible transcription. May be involved in the induction of the systemic acquired resistance (SAR) via its interaction with NPR1. Could also bind to the Hex-motif (5'-TGACGTGG-3') another cis-acting element found in plant histone promoters. |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AK353085 | 0.0 | AK353085.1 Thellungiella halophila mRNA, complete cds, clone: RTFL01-10-F22. |