 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
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| TF ID |
Thhalv10013850m |
| Common Name | EUTSA_v10013850mg |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Eutremeae; Eutrema
|
| Family |
G2-like |
| Protein Properties |
Length: 376aa MW: 41975.9 Da PI: 7.0579 |
| Description |
G2-like family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Thhalv10013850m | genome | JGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | G2-like | 101.9 | 4.1e-32 | 195 | 249 | 1 | 55 |
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55
k+r+rWt++LHe+Fve+v++LGG++kAtPk+il+lm+ +gLt+ hvkSHLQkYR+
Thhalv10013850m 195 KTRIRWTQDLHEKFVECVNRLGGADKATPKAILKLMDSEGLTIFHVKSHLQKYRI 249
68****************************************************7 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 376 aa
Download sequence Send
to blast |
MDNINFEFSN ASQGSRLQSQ PQPPQPFNLQ DVNMIHYNQS SPWTTETFSD FTPYDCTANP 60
SFSGQCSLSK PYPSSLHPYH HQSSDPPSLD QSESMVPMQP LPDRYLKPLY QRSCANDFAA 120
ANASSASYSL SFEASQDSQG LCRSTYSNSN VTQLNFSSSH HQPKQTHPRF SSPPSFSTHG 180
SGSMAPNCGT ITGNKTRIRW TQDLHEKFVE CVNRLGGADK ATPKAILKLM DSEGLTIFHV 240
KSHLQKYRIA KYIPDSEEGK FEKRACAKEL SQLDTKTGVQ IKEALQLQLD VQRHLHEQLE 300
IQRNLQLRIE EQGKQLKIMI EQQQKTKESL LKTPNTEASL PLSAPDHSPP PVSIQDPEAL 360
MLTNYGDALL HSKIG*
|
| 3D Structure ? help Back to Top |
 |
| PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
| 6j4k_A | 3e-23 | 195 | 252 | 2 | 59 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j4k_B | 3e-23 | 195 | 252 | 2 | 59 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j5b_A | 3e-23 | 195 | 252 | 2 | 59 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j5b_C | 3e-23 | 195 | 252 | 2 | 59 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j5b_D | 3e-23 | 195 | 252 | 2 | 59 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j5b_F | 3e-23 | 195 | 252 | 2 | 59 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j5b_H | 3e-23 | 195 | 252 | 2 | 59 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j5b_J | 3e-23 | 195 | 252 | 2 | 59 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| Search in ModeBase |
| Annotation --
Nucleotide ? help
Back to Top |
| Source |
Hit ID |
E-value |
Description |
| GenBank | AK226644 | 0.0 | AK226644.1 Arabidopsis thaliana mRNA for hypothetical protein, complete cds, clone: RAFL07-39-G11. |
| GenBank | BT012658 | 0.0 | BT012658.1 Arabidopsis thaliana At5g06800 gene, complete cds. |
