 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
Thhalv10013729m |
| Common Name | EUTSA_v10013729mg |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Eutremeae; Eutrema
|
| Family |
G2-like |
| Protein Properties |
Length: 400aa MW: 44729.8 Da PI: 6.7605 |
| Description |
G2-like family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Thhalv10013729m | genome | JGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | G2-like | 107.3 | 8.3e-34 | 45 | 99 | 1 | 55 |
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55
kprl+Wtp+LHerFveav+qLGG +kAtPkti+++m+++gLtl+h+kSHLQkYRl
Thhalv10013729m 45 KPRLKWTPDLHERFVEAVNQLGGGDKATPKTIMKVMGIPGLTLYHLKSHLQKYRL 99
79****************************************************8 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 400 aa
Download sequence Send
to blast |
MYYHNQHQGK SILSSSRMPI SSERHPFLRG NDTGDSGLIL STDAKPRLKW TPDLHERFVE 60
AVNQLGGGDK ATPKTIMKVM GIPGLTLYHL KSHLQKYRLS KNLNGQANSS LNKTSVMTMV 120
EENTPEADES HGESLSIGPQ PSINLPISDA LQMQIEVQRR LHEQLEVQRH LQLRIEAQGK 180
YLQAILLKAQ ETLGRQNLGP EATKAQLSEL VSKASAEYPD TSFLEPKQVQ TLGHQQMQTT 240
YPQNSSLESC LTSSEGALKP PKMLENGLGL RTYIGDSTSE QKEIMEEPFF QRMELTWGEE 300
EGHNRSYLST IGHNNNAEQR TLSSRRRSPG RLSIGVGLHE QNRGGGSGNS GYTEERFNEN 360
GEDCKLETRT RTALDLNTHD DNYGTTRPKQ FDLNGFSWN*
|
| 3D Structure ? help Back to Top |
 |
| PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
| 6j4k_A | 4e-20 | 44 | 101 | 1 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j4k_B | 4e-20 | 44 | 101 | 1 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j4r_A | 3e-20 | 45 | 101 | 1 | 57 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j4r_B | 3e-20 | 45 | 101 | 1 | 57 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j4r_C | 3e-20 | 45 | 101 | 1 | 57 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j4r_D | 3e-20 | 45 | 101 | 1 | 57 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j5b_A | 4e-20 | 44 | 101 | 1 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j5b_C | 4e-20 | 44 | 101 | 1 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j5b_D | 4e-20 | 44 | 101 | 1 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j5b_F | 4e-20 | 44 | 101 | 1 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j5b_H | 4e-20 | 44 | 101 | 1 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j5b_J | 4e-20 | 44 | 101 | 1 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| Search in ModeBase |
| Functional Description ? help
Back to Top |
| Source |
Description |
| UniProt | Transcription factor that may act on the GAL1 promoter (PubMed:12008900). Acts redundantly with MYR2 as a repressor of flowering and organ elongation under decreased light intensity (PubMed:21255164). Represses gibberellic acid (GA)-dependent responses and affects levels of bioactive GA (PubMed:21255164). {ECO:0000269|PubMed:21255164, ECO:0000305|PubMed:12008900}. |
| Annotation --
Nucleotide ? help
Back to Top |
| Source |
Hit ID |
E-value |
Description |
| GenBank | AK353077 | 0.0 | AK353077.1 Thellungiella halophila mRNA, complete cds, clone: RTFL01-20-K05. |
