 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
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| TF ID |
Thhalv10008824m |
| Common Name | EUTSA_v10008824mg |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Eutremeae; Eutrema
|
| Family |
WOX |
| Protein Properties |
Length: 198aa MW: 22099.4 Da PI: 6.2447 |
| Description |
WOX family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Thhalv10008824m | genome | JGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | Homeobox | 65.3 | 8.6e-21 | 74 | 134 | 2 | 57 |
T--SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS
Homeobox 2 rkRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57
r+R+t+t++ql++Le+ +e+ + +p++++++e+A+ l +++e++V++WFqNrRa+ k+
Thhalv10008824m 74 RHRWTPTSTQLQILESIYEEgSGTPNRRRIREIATDLsehgQISETNVYNWFQNRRARSKR 134
89*****************99**************************************97 PP
|
| 2 | Wus_type_Homeobox | 101.5 | 6.1e-33 | 73 | 136 | 2 | 65 |
Wus_type_Homeobox 2 artRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65
+r+RWtPt++Q++iLe++y++G tPn+++i++i++ L+e+G+i+++NV++WFQNr+aR+++kq
Thhalv10008824m 73 SRHRWTPTSTQLQILESIYEEGSGTPNRRRIREIATDLSEHGQISETNVYNWFQNRRARSKRKQ 136
689***********************************************************97 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0001944 | Biological Process | vasculature development |
| GO:0010072 | Biological Process | primary shoot apical meristem specification |
| GO:0051301 | Biological Process | cell division |
| GO:0005634 | Cellular Component | nucleus |
| GO:0044212 | Molecular Function | transcription regulatory region DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 198 aa
Download sequence Send
to blast |
MERGSQNGAY DVRVMTEEQM ELLRKQIAVY AVICDQLVSL HNSLSSFSSG TNSMSGGYFD 60
PMRASSSAHK ISSRHRWTPT STQLQILESI YEEGSGTPNR RRIREIATDL SEHGQISETN 120
VYNWFQNRRA RSKRKQPQTT TTTDVAEDAA VTTEERTLCG DSGGFESYKH ILFPSPDLGI 180
EHLLSKGEIS GEQNSYI*
|
| Nucleic Localization
Signal ? help
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 |
| No. |
Start |
End |
Sequence |
| 1 | 127 | 135 | RRARSKRKQ |
| Functional Description ? help
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| Source |
Description |
| UniProt | Transcription factor which may be involved in developmental processes. {ECO:0000250}. |
