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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
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| TF ID |
Thhalv10008054m |
| Common Name | EUTSA_v10008054mg |
| Organism |
|
| Taxonomic ID |
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| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Eutremeae; Eutrema
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| Family |
G2-like |
| Protein Properties |
Length: 353aa MW: 39660.9 Da PI: 6.1043 |
| Description |
G2-like family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Thhalv10008054m | genome | JGI | View CDS |
|
| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | G2-like | 100.9 | 8.1e-32 | 187 | 242 | 1 | 56 |
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRla 56
k+r++W+++LH+rF++a+++LGG+++AtPk+i+elmkv+gLt+++vkSHLQkYRl+
Thhalv10008054m 187 KQRRCWSSQLHRRFLNALQHLGGPHVATPKQIRELMKVDGLTNDEVKSHLQKYRLH 242
79****************************************************97 PP
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| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0009788 | Biological Process | negative regulation of abscisic acid-activated signaling pathway |
| GO:0016036 | Biological Process | cellular response to phosphate starvation |
| GO:0032107 | Biological Process | regulation of response to nutrient levels |
| GO:0080022 | Biological Process | primary root development |
| GO:1901699 | Biological Process | cellular response to nitrogen compound |
| GO:0005634 | Cellular Component | nucleus |
| GO:0003677 | Molecular Function | DNA binding |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 353 aa
Download sequence Send
to blast |
MIKKLSNMNY NQKRERCGQY IEALEEERRK IHVFQRELPL CLDLVTQAIE ACKREVPETT 60
VENAYGQPEC SEQTTGECGP VLEQFLTIKD SSTSNEEEQE EEDDELDDEH GNHDPDKDSE 120
DKNMKSDWLK SVQLWNQPDP LLLKEERSQR EMMETVVNRD ESMRKDPATS GGDGRKREAE 180
KDGGGRKQRR CWSSQLHRRF LNALQHLGGP HVATPKQIRE LMKVDGLTND EVKSHLQKYR 240
LHTRRPSQPA PNSGNSQTQH FVVVGGLWVP QSDYSTGKTT GGATASGTTT TTNTGIYGAM 300
AAPPPPQWPS HSNFRSSIIV EEGSGSHSEE VVVRCSSPAM SSSTRNHYVK KN*
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| Functional Description ? help
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| Source |
Description |
| UniProt | Transcription factor involved in nitrate and phosphate signaling in roots. Integrates nitrate and phosphate starvation responses and adaptation of root architecture depending on nutrient availabilities. Acts downstream of the nitrate sensor and transporter NPF6.3/NRT1.1. Represses primary root development in response to phosphate deficiency conditions, only when nitrate is present (PubMed:25723764). Involved in the modulation of primary root and root hair growth in phosphate-deprived environement (PubMed:19341407). May be required for suppressing abscisic acid (ABA) signaling in germinating embryo axis, which promotes the timely germination of seeds (PubMed:22545134). {ECO:0000269|PubMed:19341407, ECO:0000269|PubMed:22545134, ECO:0000269|PubMed:25723764}. |
| Regulation -- Description ? help
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| Source |
Description |
| UniProt | INDUCTION: Induced by nitrate (PubMed:25723764). Down-regulated under nitrate deprivation conditions (PubMed:27419465). {ECO:0000269|PubMed:25723764, ECO:0000269|PubMed:27419465}. |
