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Plant Transcription
Factor Database
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Transcription Factor Information
|
Basic
Information? help
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| TF ID |
Thhalv10007696m |
| Common Name | EUTSA_v10007696mg |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Eutremeae; Eutrema
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| Family |
bHLH |
| Protein Properties |
Length: 430aa MW: 47088.8 Da PI: 5.9801 |
| Description |
bHLH family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Thhalv10007696m | genome | JGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | HLH | 14.2 | 8.1e-05 | 272 | 319 | 3 | 55 |
HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
HLH 3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55
+h+ +Er RR++ +++ L++l+P + +k Ka +L + ++Y++sLq
Thhalv10007696m 272 NSHSLAERVRREK-SKRMKFLQDLVPGC----DKVTGKAVMLDEIINYVQSLQ 319
58**********9.56899********9....555*****************9 PP
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| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0009637 | Biological Process | response to blue light |
| GO:0009911 | Biological Process | positive regulation of flower development |
| GO:0046983 | Molecular Function | protein dimerization activity |
| Sequence ? help Back to Top |
| Protein Sequence Length: 430 aa
Download sequence Send
to blast |
MNLSEDKNEF AGDNSNRDND GVKNFDSVNT PVDWRISASN PPVSYHLENP MPSICQSSSS 60
PSQMMDSFRQ NLWYDGGFNV HSTDAGNDDS TSFRGNIDRP LEMGWSMAQF PADSGFTERA 120
AKFSLFGCGS FSELMMNQQG APESNGLFLQ DTEVASGSKR DNDGPASKLV KDRSNGPGNV 180
SEDSQSSGGN GHVKCGETSS SSKKRNRIGK DFDPDQSRRA QQSGEEQEDK KNKKDEQSPN 240
SNADKTNSGK QVSDPLKDGY IHMRARRGQA TNSHSLAERV RREKSKRMKF LQDLVPGCDK 300
VTGKAVMLDE IINYVQSLQC QIEFLSMKLS TVNPPLDFGL ESLLAKDALQ LSAPALPQSM 360
SMLYPPLSYP SQTGIMQPNF SSMSPMNGGL KRQETHGYKS DHHNIVHMNH GTGTAPDHED 420
ATANTKVEP*
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| Functional Description ? help
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| Source |
Description |
| UniProt | Transcriptional activator involved in cell elongation. Regulates the expression of a subset of genes involved in cell expansion by binding to the G-box motif. Binds to chromatin DNA of the FT gene and promotes its expression, and thus triggers flowering in response to blue light (PubMed:24130508). {ECO:0000269|PubMed:23161888, ECO:0000269|PubMed:24130508}. |
| Best hit in Arabidopsis thaliana ? help
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| Hit ID |
E-value |
Description |
| AT1G26260.2 | 0.0 | cryptochrome-interacting basic-helix-loop-helix 5 |
