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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Thhalv10007692m |
Common Name | EUTSA_v10007692mg |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Eutremeae; Eutrema
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Family |
bZIP |
Protein Properties |
Length: 431aa MW: 47540.4 Da PI: 6.3816 |
Description |
bZIP family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Thhalv10007692m | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | bZIP_1 | 30.9 | 5.9e-10 | 210 | 266 | 5 | 61 |
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklks 61
kr++r NR +A rs +RK +i+eLe+kv++L++e ++L +l l+ l
Thhalv10007692m 210 KRAKRIWANRQSAARSKERKMRYIAELERKVQTLQTEATSLSAQLTLLQRDTNGLSV 266
9*******************************************9999877666655 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 431 aa
Download sequence Send
to blast |
MDKEKSPAPP SGGLPPPSGR YSAFSPNGSG FPIKSESSFP HLTPSGSSSD ANRFSHDISR 60 MLDNPPKNLG HRRAHSEILT LPDDLSFDSD LGVVGAADGP SFSDETDEDL LYMYLDMDKF 120 NSSATSSSQM GEPSEPAWRN ELGSTSNLQS TPGSSSERPR IRHQHSQSMD GSTTIKPEML 180 MSGNEDVPGV DSKKAISAAK LSELALIDPK RAKRIWANRQ SAARSKERKM RYIAELERKV 240 QTLQTEATSL SAQLTLLQRD TNGLSVENND LKLRVQTMEQ QVHLQDALND ALKEEVQHLK 300 VLTGQGVSNG ASMMNYGSYG SNQQFYPNNQ SMHTMLAAQQ LQQLQIHSQK QQQQQQQQQQ 360 QQQQQQQQQQ QQQQQFQFSS NNFISFISAA AAANPQQDTK RCHGAEKAHV SSVQKENVTS 420 PDLEVPSTKD *
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Functional Description ? help
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Source |
Description |
UniProt | Putative transcription factor with an activatory role. |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AK353381 | 0.0 | AK353381.1 Thellungiella halophila mRNA, complete cds, clone: RTFL01-35-L02. |