PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Thhalv10007500m
Common NameEUTSA_v10007490mg
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Eutremeae; Eutrema
Family bZIP
Protein Properties Length: 484aa    MW: 53829.4 Da    PI: 8.0928
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Thhalv10007500mgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_131.83e-10179220445
                      XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
           bZIP_1   4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaL 45 
                       k  rr+++NReAAr+sR+RKka++++Le    +L++  ++L
  Thhalv10007500m 179 AKTLRRLAQNREAARKSRLRKKAYVQQLESSRIKLSQLEQEL 220
                      6889*************************8766666655544 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003381.2E-6176253IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.289178222IPR004827Basic-leucine zipper domain
PfamPF001702.0E-7179220IPR004827Basic-leucine zipper domain
CDDcd147083.55E-23180232No hitNo description
SuperFamilySSF579599.64E-7180222No hitNo description
Gene3DG3DSA:1.20.5.1701.0E-7181224No hitNo description
PROSITE patternPS000360183198IPR004827Basic-leucine zipper domain
PfamPF141442.3E-28261336IPR025422Transcription factor TGA like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 484 aa     Download sequence    Send to blast
MANHRVISDN ATNHNHNHHL SYSLLHGLNN NPPPPGFINQ DGSSSFDFGE LEEAIVLQGV  60
KYRNDEAKPR GGGATTLEMF PSWPIRTHQT LPTESSKSGG ESTDSGSANF SGKAESQQPE  120
SPMSSKENHH LMLQHHNNNN NMTNSSSTSG LPSTSRTPAT PKPSEDKRKA TTSGKQLDAK  180
TLRRLAQNRE AARKSRLRKK AYVQQLESSR IKLSQLEQEL QRARSQGLFM GGCGPPGPNI  240
TSGAAIFDME YGRWLEDDNR HMSEIRTGLQ AHLSDNDLRL IVDGYITHFD EILRLKAVAA  300
KADVFHLIIG TWMSPAERCF IWIAGFRPSD LIKILVSQMD LLTEQQLMGI YGLQHSSQQA  360
EEALSQGLEQ LQHSLIDTLA ASPVIDGMQQ MAVALGKLSN LEGFIRQADN LRQQTVHQLR  420
RILTVRQAAR CFLVIGEYYG RLRALSSLWL SRPRETLISD ETSCQTTTDL QIVQSSRNHF  480
SNF*
Functional Description ? help Back to Top
Source Description
UniProtTogether with TGA10, basic leucine-zipper transcription factor required for anther development, probably via the activation of SPL expression in anthers and via the regulation of genes with functions in early and middle tapetal development (PubMed:20805327). Required for signaling responses to pathogen-associated molecular patterns (PAMPs) such as flg22 that involves chloroplastic reactive oxygen species (ROS) production and subsequent expression of H(2)O(2)-responsive genes (PubMed:27717447). {ECO:0000269|PubMed:20805327, ECO:0000269|PubMed:27717447}.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00131DAPTransfer from AT1G08320Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapThhalv10007500m
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: Induced by flg22 in leaves. {ECO:0000269|PubMed:27717447}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAJ3147570.0AJ314757.1 Arabidopsis thaliana mRNA for bZIP transcription factor (AtbZIP21 gene).
GenBankHQ1327430.0HQ132743.1 Arabidopsis thaliana bZIP21 (At1g08320) mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_006417704.10.0transcription factor TGA9 isoform X2
SwissprotQ93XM60.0TGA9_ARATH; Transcription factor TGA9
TrEMBLV4L1A30.0V4L1A3_EUTSA; Uncharacterized protein
STRINGXP_006417705.10.0(Eutrema salsugineum)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G08320.30.0bZIP family protein
Publications ? help Back to Top
  1. Gutsche N,Zachgo S
    The N-Terminus of the Floral Arabidopsis TGA Transcription Factor PERIANTHIA Mediates Redox-Sensitive DNA-Binding.
    PLoS ONE, 2016. 11(4): p. e0153810
    [PMID:27128442]
  2. Noshi M,Mori D,Tanabe N,Maruta T,Shigeoka S
    Arabidopsis clade IV TGA transcription factors, TGA10 and TGA9, are involved in ROS-mediated responses to bacterial PAMP flg22.
    Plant Sci., 2016. 252: p. 12-21
    [PMID:27717447]
  3. Ezer D, et al.
    The G-Box Transcriptional Regulatory Code in Arabidopsis.
    Plant Physiol., 2017. 175(2): p. 628-640
    [PMID:28864470]