PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Thhalv10007490m
Common NameEUTSA_v10007490mg
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Eutremeae; Eutrema
Family bZIP
Protein Properties Length: 488aa    MW: 54158.8 Da    PI: 7.8148
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Thhalv10007490mgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_131.83.1e-10183224445
                      XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
           bZIP_1   4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaL 45 
                       k  rr+++NReAAr+sR+RKka++++Le    +L++  ++L
  Thhalv10007490m 183 AKTLRRLAQNREAARKSRLRKKAYVQQLESSRIKLSQLEQEL 224
                      6889*************************8766666655544 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003381.2E-6180257IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.289182226IPR004827Basic-leucine zipper domain
PfamPF001702.0E-7183224IPR004827Basic-leucine zipper domain
CDDcd147081.67E-23184236No hitNo description
SuperFamilySSF579599.64E-7184226No hitNo description
Gene3DG3DSA:1.20.5.1701.0E-7185228No hitNo description
PROSITE patternPS000360187202IPR004827Basic-leucine zipper domain
PfamPF141442.3E-28265340IPR025422Transcription factor TGA like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 488 aa     Download sequence    Send to blast
MANHRVISDN ATNHNHNHHL SYSLLHGLNN NPPPPGFINQ DGSSSFDFGE LEEAIVLQGV  60
KYRNDEAKPP LFAGGGGATT LEMFPSWPIR THQTLPTESS KSGGESTDSG SANFSGKAES  120
QQPESPMSSK ENHHLMLQHH NNNNNMTNSS STSGLPSTSR TPATPKPSED KRKATTSGKQ  180
LDAKTLRRLA QNREAARKSR LRKKAYVQQL ESSRIKLSQL EQELQRARSQ GLFMGGCGPP  240
GPNITSGAAI FDMEYGRWLE DDNRHMSEIR TGLQAHLSDN DLRLIVDGYI THFDEILRLK  300
AVAAKADVFH LIIGTWMSPA ERCFIWIAGF RPSDLIKILV SQMDLLTEQQ LMGIYGLQHS  360
SQQAEEALSQ GLEQLQHSLI DTLAASPVID GMQQMAVALG KLSNLEGFIR QADNLRQQTV  420
HQLRRILTVR QAARCFLVIG EYYGRLRALS SLWLSRPRET LISDETSCQT TTDLQIVQSS  480
RNHFSNF*
Functional Description ? help Back to Top
Source Description
UniProtTogether with TGA10, basic leucine-zipper transcription factor required for anther development, probably via the activation of SPL expression in anthers and via the regulation of genes with functions in early and middle tapetal development (PubMed:20805327). Required for signaling responses to pathogen-associated molecular patterns (PAMPs) such as flg22 that involves chloroplastic reactive oxygen species (ROS) production and subsequent expression of H(2)O(2)-responsive genes (PubMed:27717447). {ECO:0000269|PubMed:20805327, ECO:0000269|PubMed:27717447}.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00131DAPTransfer from AT1G08320Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapThhalv10007490m
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: Induced by flg22 in leaves. {ECO:0000269|PubMed:27717447}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAJ3147570.0AJ314757.1 Arabidopsis thaliana mRNA for bZIP transcription factor (AtbZIP21 gene).
GenBankHQ1327430.0HQ132743.1 Arabidopsis thaliana bZIP21 (At1g08320) mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_006417705.10.0transcription factor TGA9 isoform X1
SwissprotQ93XM60.0TGA9_ARATH; Transcription factor TGA9
TrEMBLV4L8H90.0V4L8H9_EUTSA; Uncharacterized protein
STRINGXP_006417705.10.0(Eutrema salsugineum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM55242441
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G08320.30.0bZIP family protein
Publications ? help Back to Top
  1. Gutsche N,Zachgo S
    The N-Terminus of the Floral Arabidopsis TGA Transcription Factor PERIANTHIA Mediates Redox-Sensitive DNA-Binding.
    PLoS ONE, 2016. 11(4): p. e0153810
    [PMID:27128442]
  2. Noshi M,Mori D,Tanabe N,Maruta T,Shigeoka S
    Arabidopsis clade IV TGA transcription factors, TGA10 and TGA9, are involved in ROS-mediated responses to bacterial PAMP flg22.
    Plant Sci., 2016. 252: p. 12-21
    [PMID:27717447]
  3. Ezer D, et al.
    The G-Box Transcriptional Regulatory Code in Arabidopsis.
    Plant Physiol., 2017. 175(2): p. 628-640
    [PMID:28864470]