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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Thhalv10007490m |
Common Name | EUTSA_v10007490mg |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Eutremeae; Eutrema
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Family |
bZIP |
Protein Properties |
Length: 488aa MW: 54158.8 Da PI: 7.8148 |
Description |
bZIP family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Thhalv10007490m | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | bZIP_1 | 31.8 | 3.1e-10 | 183 | 224 | 4 | 45 |
XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
bZIP_1 4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaL 45
k rr+++NReAAr+sR+RKka++++Le +L++ ++L
Thhalv10007490m 183 AKTLRRLAQNREAARKSRLRKKAYVQQLESSRIKLSQLEQEL 224
6889*************************8766666655544 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 488 aa
Download sequence Send
to blast |
MANHRVISDN ATNHNHNHHL SYSLLHGLNN NPPPPGFINQ DGSSSFDFGE LEEAIVLQGV 60 KYRNDEAKPP LFAGGGGATT LEMFPSWPIR THQTLPTESS KSGGESTDSG SANFSGKAES 120 QQPESPMSSK ENHHLMLQHH NNNNNMTNSS STSGLPSTSR TPATPKPSED KRKATTSGKQ 180 LDAKTLRRLA QNREAARKSR LRKKAYVQQL ESSRIKLSQL EQELQRARSQ GLFMGGCGPP 240 GPNITSGAAI FDMEYGRWLE DDNRHMSEIR TGLQAHLSDN DLRLIVDGYI THFDEILRLK 300 AVAAKADVFH LIIGTWMSPA ERCFIWIAGF RPSDLIKILV SQMDLLTEQQ LMGIYGLQHS 360 SQQAEEALSQ GLEQLQHSLI DTLAASPVID GMQQMAVALG KLSNLEGFIR QADNLRQQTV 420 HQLRRILTVR QAARCFLVIG EYYGRLRALS SLWLSRPRET LISDETSCQT TTDLQIVQSS 480 RNHFSNF*
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Functional Description ? help
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Source |
Description |
UniProt | Together with TGA10, basic leucine-zipper transcription factor required for anther development, probably via the activation of SPL expression in anthers and via the regulation of genes with functions in early and middle tapetal development (PubMed:20805327). Required for signaling responses to pathogen-associated molecular patterns (PAMPs) such as flg22 that involves chloroplastic reactive oxygen species (ROS) production and subsequent expression of H(2)O(2)-responsive genes (PubMed:27717447). {ECO:0000269|PubMed:20805327, ECO:0000269|PubMed:27717447}. |
Regulation -- Description ? help
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Source |
Description |
UniProt | INDUCTION: Induced by flg22 in leaves. {ECO:0000269|PubMed:27717447}. |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AJ314757 | 0.0 | AJ314757.1 Arabidopsis thaliana mRNA for bZIP transcription factor (AtbZIP21 gene). |
GenBank | HQ132743 | 0.0 | HQ132743.1 Arabidopsis thaliana bZIP21 (At1g08320) mRNA, complete cds. |
Publications
? help Back to Top |
- Gutsche N,Zachgo S
The N-Terminus of the Floral Arabidopsis TGA Transcription Factor PERIANTHIA Mediates Redox-Sensitive DNA-Binding. PLoS ONE, 2016. 11(4): p. e0153810 [PMID:27128442] - Noshi M,Mori D,Tanabe N,Maruta T,Shigeoka S
Arabidopsis clade IV TGA transcription factors, TGA10 and TGA9, are involved in ROS-mediated responses to bacterial PAMP flg22. Plant Sci., 2016. 252: p. 12-21 [PMID:27717447] - Ezer D, et al.
The G-Box Transcriptional Regulatory Code in Arabidopsis. Plant Physiol., 2017. 175(2): p. 628-640 [PMID:28864470]
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