PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Thhalv10005699m
Common NameEUTSA_v10005699mg
Organism
Eutrema salsugineum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Eutremeae; Eutrema
Family SAP
Protein Properties Length: 397aa    MW: 44533.6 Da    PI: 8.0353
Description SAP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Thhalv10005699mgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SAP636.83.9e-1941539575454
              SAP  75 nvfqvcstwravsrsdllwqrltrriWrrtkllrdtWreeyiyrhrtarnfrtrrysyvtlqfdpadvdedndadalsCrclalsdkylaaGfa 168
                       v  vc+tw+avsrsd+lwq l+r++W+rt+l++dtWree++yrhrtarnfrtr+  ++tl+fdp+dvde   +d+lsCrcl+lsd+ylaaGfa
  Thhalv10005699m  15 RVKLVCTTWQAVSRSDHLWQLLCRQVWTRTSLMHDTWREEFMYRHRTARNFRTRNNIHFTLNFDPSDVDE---PDSLSCRCLTLSDRYLAAGFA 105
                      56679*************************************************************9998...689****************** PP

              SAP 169 dGavrlfdletrlhvstflpqhrdrlGrfsravsGivisdsrlvfatldGdihvavidgagaaaarrallGdvvndGalvdfaGsgrWwvGlya 262
                      dG+vrlf l++rlhv+t++p  rdr+GrfsravsGivisdsrlvfat+dGdihva++dg g +++r+a++Gd+vndGalvdf+G+gr+wvGl+a
  Thhalv10005699m 106 DGTVRLFLLNNRLHVRTLRPPLRDRFGRFSRAVSGIVISDSRLVFATMDGDIHVAAMDGIG-GHTRTAYAGDIVNDGALVDFTGCGRYWVGLFA 198
                      ***********************************************************87.9******************************* PP

              SAP 263 GvpGrafhiWdaeteelvfvGGsltdPeavmGWhmlteltelvGrvrvteretavaCtslrlvvfdlrnqgvvlreeeer.rGlivssldasne 355
                      GvpGrafhiWd+++ee++fvGGsltdPeavmGWh+ltelt+++Gr+r+++ etavaCt++r++v+dlrnqgv+++e+ee+ rGliv+++da++e
  Thhalv10005699m 199 GVPGRAFHIWDCNSEETTFVGGSLTDPEAVMGWHTLTELTTSLGRLRISGGETAVACTRWRIMVIDLRNQGVIIGEDEEQrRGLIVTGFDANDE 292
                      **************************************************************************99888779************ PP

              SAP 356 ayvvvdsrGvatvrrvenleevcrfrvrg.aqrgvlgCvnggyalvyaggvlrvWeiekkegylyslrervgevnalvaddrhvavsss....d 444
                      ayv++d rG+a+vrr  + e+vc+frv+g aqr+v+gCvn+ +al++aggv+rvWe+e+ e y+ys+rervgev+a+vaddrhvav+ss     
  Thhalv10005699m 293 AYVRMDGRGNAIVRRTRTQETVCEFRVSGaAQRRVMGCVNRLHALMCAGGVVRVWEVERGE-YVYSFRERVGEVDAIVADDRHVAVASSsstgV 385
                      *****************************9*****************************77.************************99944444 PP

              SAP 445 gtihlldfga 454
                      +tihl+dfga
  Thhalv10005699m 386 STIHLWDFGA 395
                      68*******8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.1280.507.8E-81386No hitNo description
SuperFamilySSF813831.52E-71579IPR001810F-box domain
SuperFamilySSF509783.41E-1389162IPR017986WD40-repeat-containing domain
Gene3DG3DSA:2.130.10.104.3E-1190163IPR015943WD40/YVTN repeat-like-containing domain
SuperFamilySSF509783.41E-13223392IPR017986WD40-repeat-containing domain
Gene3DG3DSA:2.130.10.104.3E-11310393IPR015943WD40/YVTN repeat-like-containing domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009554Biological Processmegasporogenesis
GO:0009908Biological Processflower development
GO:0030163Biological Processprotein catabolic process
GO:0046622Biological Processpositive regulation of organ growth
GO:0005634Cellular Componentnucleus
GO:0005515Molecular Functionprotein binding
Sequence ? help Back to Top
Protein Sequence    Length: 397 aa     Download sequence    Send to blast
GFCCKIRSLQ RLISRVKLVC TTWQAVSRSD HLWQLLCRQV WTRTSLMHDT WREEFMYRHR  60
TARNFRTRNN IHFTLNFDPS DVDEPDSLSC RCLTLSDRYL AAGFADGTVR LFLLNNRLHV  120
RTLRPPLRDR FGRFSRAVSG IVISDSRLVF ATMDGDIHVA AMDGIGGHTR TAYAGDIVND  180
GALVDFTGCG RYWVGLFAGV PGRAFHIWDC NSEETTFVGG SLTDPEAVMG WHTLTELTTS  240
LGRLRISGGE TAVACTRWRI MVIDLRNQGV IIGEDEEQRR GLIVTGFDAN DEAYVRMDGR  300
GNAIVRRTRT QETVCEFRVS GAAQRRVMGC VNRLHALMCA GGVVRVWEVE RGEYVYSFRE  360
RVGEVDAIVA DDRHVAVASS SSTGVSTIHL WDFGAL*
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional regulator involved in the specification of floral identity. Acts as A class cadastral protein by repressing the C class floral homeotic gene AGAMOUS in the external flower organs in association with APETALA2 and other repressors. Is required to maintain floral meristem identity in concert with AGAMOUS. Interacts also with APETALA2 to ensure the normal development of ovule.
Cis-element ? help Back to Top
SourceLink
PlantRegMapThhalv10005699m
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_024007533.10.0transcriptional regulator STERILE APETALA
SwissprotQ9FKH10.0SAP_ARATH; Transcriptional regulator STERILE APETALA
TrEMBLV4L0G80.0V4L0G8_EUTSA; Uncharacterized protein (Fragment)
STRINGXP_006395932.10.0(Eutrema salsugineum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM110182634
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G35770.10.0SAP family protein
Publications ? help Back to Top
  1. Li N, et al.
    STERILE APETALA modulates the stability of a repressor protein complex to control organ size in Arabidopsis thaliana.
    PLoS Genet., 2018. 14(2): p. e1007218
    [PMID:29401459]