 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
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| TF ID |
Thhalv10005559m |
| Common Name | EUTSA_v10005559mg |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Eutremeae; Eutrema
|
| Family |
GeBP |
| Protein Properties |
Length: 286aa MW: 32209.4 Da PI: 9.9985 |
| Description |
GeBP family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Thhalv10005559m | genome | JGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | DUF573 | 83.7 | 2.6e-26 | 76 | 175 | 3 | 98 |
DUF573 3 fqrlwseeDeivlLqGlidfkaktgkspsddidafyefvkksisfkvsksqlveKirrLKkKfkkkvkk.....aksgkepsfskehdqkifel 91
+r+++eeD ++lLqG++df+++ g +p++d d+fy fvk++is+++s+sq+++K+r+LK+ + v+k + +++++fs++ qk+fel
Thhalv10005559m 76 KKRVFTEEDSVALLQGFLDFNSTSG-DPFKDKDRFYGFVKERISVNASQSQVTDKVRKLKQNIANTVRKsiqkgKGGEDNIVFSRDVKQKVFEL 168
68******************99999.*************************************9999998666333455689************ PP
DUF573 92 skkiWgs 98
s+kiWgs
Thhalv10005559m 169 SRKIWGS 175
*****95 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 286 aa
Download sequence Send
to blast |
MAPKKEKKTA NPRLVSSKED EEEEESHSFK PSHTDAKDTH VEKSTNRKPK PEISHPKSST 60
AKRSLEKADH DEVRKKKRVF TEEDSVALLQ GFLDFNSTSG DPFKDKDRFY GFVKERISVN 120
ASQSQVTDKV RKLKQNIANT VRKSIQKGKG GEDNIVFSRD VKQKVFELSR KIWGSDGALP 180
SKSMKKLGGK QNIEEEEKPS TPLSSGVELV SYWKAEKNHS LALDEATALA YWNMAADGRK 240
KRALEEMLKR IKAKEMELCL ERSTLVTDTL NFICKEDIGS SSGKF*
|
| Best hit in Arabidopsis thaliana ? help
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| Hit ID |
E-value |
Description |
| AT4G25210.1 | 9e-56 | DNA-binding storekeeper protein-related transcriptional regulator |
