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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Thhalv10005423m |
Common Name | EUTSA_v10005423mg |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Eutremeae; Eutrema
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Family |
bZIP |
Protein Properties |
Length: 172aa MW: 19924.1 Da PI: 5.6657 |
Description |
bZIP family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Thhalv10005423m | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | bZIP_1 | 48.8 | 1.5e-15 | 79 | 137 | 5 | 63 |
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63
+++rr+++NRe+ArrsR RK+ ++eL v L eN++L ++l++l++ +k+ +e+
Thhalv10005423m 79 RKQRRMISNRESARRSRMRKQRHLDELWSQVMWLRIENHQLLDKLNNLSESHEKVLQEN 137
689***************************************************99997 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0042803 | Molecular Function | protein homodimerization activity |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
GO:0046982 | Molecular Function | protein heterodimerization activity |
Sequence ? help Back to Top |
Protein Sequence Length: 172 aa
Download sequence Send
to blast |
MQPQDVFSLN NYLNSSIPSP YPSHLPIAST FPINGQNTNP FYGFQSATNN PQSMSLSSNN 60 STSDEAEEQQ TDKNIINERK QRRMISNRES ARRSRMRKQR HLDELWSQVM WLRIENHQLL 120 DKLNNLSESH EKVLQENAQL KEETSELKQV ISDMQIQSPF SCFRDDIIPI E*
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Functional Description ? help
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Source |
Description |
UniProt | Probable transcription factor involved in somatic embryogenesis. Acts as positive regulator of BHLH109. {ECO:0000269|PubMed:26973252}. |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AB016878 | 0.0 | AB016878.1 Arabidopsis thaliana genomic DNA, chromosome 3, P1 clone: MQP15. |
GenBank | CP002686 | 0.0 | CP002686.1 Arabidopsis thaliana chromosome 3, complete sequence. |