PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Thhalv10005352m | ||||||||
Common Name | EUTSA_v10005352mg | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Eutremeae; Eutrema
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Family | bZIP | ||||||||
Protein Properties | Length: 176aa MW: 20482.2 Da PI: 9.368 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 31.9 | 2.8e-10 | 79 | 138 | 1 | 60 |
XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklk 60 +k+++re+rk +NRe+ArrsR + ++ +e + + +L+ N++L ++l +++ k Thhalv10005352m 79 DKDDRREKRKKSNRESARRSRMKQQKHLEDVRSQFHQLKRDNRELENQLRYAMHHCQHAK 138 689*******************************************99998888888665 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:1.20.5.170 | 1.4E-9 | 77 | 136 | No hit | No description |
SMART | SM00338 | 1.3E-9 | 79 | 143 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF00170 | 8.4E-8 | 80 | 138 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 10.105 | 81 | 127 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 3.09E-8 | 83 | 134 | No hit | No description |
CDD | cd14702 | 1.23E-14 | 84 | 135 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 86 | 101 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 176 aa Download sequence Send to blast |
MMSSLSPVFS SEPALASGFT TWDASDLFTI LDDTSLCPVE VNPGPGNTNS CQIQNQCYPN 60 PGFKDKPFNQ TGLNVVLPDK DDRREKRKKS NRESARRSRM KQQKHLEDVR SQFHQLKRDN 120 RELENQLRYA MHHCQHAKIE KDRLRLEHHI LQEKLLNLRQ VLVLRQIQQS STCASW |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Thhalv10005352m |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_006393978.2 | 1e-130 | basic leucine zipper 4 | ||||
TrEMBL | V4KJ88 | 1e-129 | V4KJ88_EUTSA; Uncharacterized protein (Fragment) | ||||
STRING | XP_006393978.1 | 1e-129 | (Eutrema salsugineum) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Malvids | OGEM3338 | 26 | 65 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G49760.1 | 4e-25 | basic leucine-zipper 5 |
Link Out ? help Back to Top | |
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Phytozome | Thhalv10005352m |
Entrez Gene | 18013077 |