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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Thhalv10005347m | ||||||||
Common Name | EUTSA_v10005347mg | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Eutremeae; Eutrema
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Family | bZIP | ||||||||
Protein Properties | Length: 187aa MW: 21625.1 Da PI: 6.6813 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 46.8 | 6.6e-15 | 72 | 133 | 2 | 63 |
XXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 2 kelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 ++++r+rr+ +NRe+ArrsR RKk +ieeL++ v++L N+ L +++ +l + ++ +e+ Thhalv10005347m 72 PDDRRARRMVSNRESARRSRMRKKRQIEELQQQVEQLMMLNHHLSEKVINLLESNHQVMQEN 133 689********************************************999988888887776 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 1.6E-16 | 71 | 135 | IPR004827 | Basic-leucine zipper domain |
Gene3D | G3DSA:1.20.5.170 | 3.4E-12 | 72 | 128 | No hit | No description |
PROSITE profile | PS50217 | 11.323 | 73 | 136 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF00170 | 1.3E-12 | 74 | 133 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 4.0E-11 | 75 | 130 | No hit | No description |
CDD | cd14702 | 2.90E-16 | 76 | 127 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 78 | 93 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 187 aa Download sequence Send to blast |
MEPPSVHRSH CFDILEGMPP QDDHFNSAFL PNTDFHVQLQ SVSPNLSSRS NNNRSHLDPN 60 GENIYHNEGL DPDDRRARRM VSNRESARRS RMRKKRQIEE LQQQVEQLMM LNHHLSEKVI 120 NLLESNHQVM QENSQLKEKV SYFQLLMAEM LIPMRNGDGS INVNHLRGET SNRTSDFFAS 180 STMIET* |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Thhalv10005347m |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_024007374.1 | 1e-129 | basic leucine zipper 43 | ||||
TrEMBL | V4KWU6 | 1e-134 | V4KWU6_EUTSA; Uncharacterized protein | ||||
STRING | XP_006394562.1 | 1e-134 | (Eutrema salsugineum) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Malvids | OGEM6185 | 25 | 45 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G60830.1 | 9e-81 | basic leucine-zipper 70 |
Link Out ? help Back to Top | |
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Phytozome | Thhalv10005347m |
Entrez Gene | 18013235 |