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Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
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| TF ID |
Thhalv10002625m |
| Common Name | EUTSA_v10002625mg |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Eutremeae; Eutrema
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| Family |
G2-like |
| Protein Properties |
Length: 297aa MW: 32232.3 Da PI: 7.2202 |
| Description |
G2-like family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Thhalv10002625m | genome | JGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | G2-like | 107.6 | 6.7e-34 | 40 | 94 | 1 | 55 |
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55
kprlrWt+eLHerFv+av+qLGG++kAtPkti+++m+vkgLtl+h+kSHLQk+Rl
Thhalv10002625m 40 KPRLRWTSELHERFVDAVTQLGGPDKATPKTIMRTMGVKGLTLYHLKSHLQKFRL 94
79****************************************************8 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0010628 | Biological Process | positive regulation of gene expression |
| GO:0016036 | Biological Process | cellular response to phosphate starvation |
| GO:0005634 | Cellular Component | nucleus |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 297 aa
Download sequence Send
to blast |
MYSAIRSLPL DGGHSGDYHG PLDGTNLPGD ACLVLTTDPK PRLRWTSELH ERFVDAVTQL 60
GGPDKATPKT IMRTMGVKGL TLYHLKSHLQ KFRLGRQACK ESTENSKDAS CVGESQDTGS 120
SSSSSLRMAA QEQNEGYQVT EALRAQMEVQ RRLHEQLEVQ RRLQLRIEAQ GKYLQSILEK 180
ACKAFDDQAA AFAGLEAARE ELSELAIKVS NSTQGTTVPF FDATKMMMMP SLSELAVAID 240
HKSNNITTNC SVESSLTSAT NGSSVSAASM KKRHRGDNVG IGYETSWIMP SSSTIG*
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| 3D Structure ? help Back to Top |
 |
| PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
| 6j4r_A | 5e-19 | 40 | 96 | 1 | 57 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j4r_B | 5e-19 | 40 | 96 | 1 | 57 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j4r_C | 5e-19 | 40 | 96 | 1 | 57 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j4r_D | 5e-19 | 40 | 96 | 1 | 57 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| Search in ModeBase |
| Functional Description ? help
Back to Top |
| Source |
Description |
| UniProt | Transcriptional activator (PubMed:26586833). Acts redundantly with PHR1 as a key component of the central regulatory system controlling transcriptional responses to Pi starvation (PubMed:26586833). Binds in a sequence-specific manner to phosphate starvation-regulated promoters (PubMed:26586833). {ECO:0000269|PubMed:26586833}. |
| Regulation -- Description ? help
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| Source |
Description |
| UniProt | INDUCTION: Up-regulated in roots by low Pi. {ECO:0000269|PubMed:26586833}. |
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | AY050355 | 0.0 | AY050355.1 Arabidopsis thaliana AT3g24120/MUJ8_3 mRNA, complete cds. |
| GenBank | AY088428 | 0.0 | AY088428.1 Arabidopsis thaliana clone 6626 mRNA, complete sequence. |
| GenBank | AY094046 | 0.0 | AY094046.1 Arabidopsis thaliana AT3g24120/MUJ8_3 mRNA, complete cds. |
