 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
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| TF ID |
Thhalv10002005m |
| Common Name | EUTSA_v10002005mg |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Eutremeae; Eutrema
|
| Family |
G2-like |
| Protein Properties |
Length: 397aa MW: 44367.4 Da PI: 4.9996 |
| Description |
G2-like family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Thhalv10002005m | genome | JGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | G2-like | 107.1 | 9.9e-34 | 234 | 288 | 1 | 55 |
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55
k+r+rWt+eLHe+Fveav+qLGGs+kAtPk +l++mkv+gLt++hvkSHLQkYR+
Thhalv10002005m 234 KARMRWTQELHEAFVEAVNQLGGSNKATPKGVLKHMKVEGLTIYHVKSHLQKYRT 288
68****************************************************8 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 397 aa
Download sequence Send
to blast |
MQDLVGRAPL WHLQEPMKST FTDISKENNG DSLSDLARTS SGPSLQNPSV AADMSFHSEH 60
NQLMEGPYHL LSENGGAVGH IYSNDLHNTP MVSHEKQNGS SDVPFISKIL DWDPASIPDL 120
FDCPFDSSTQ SNQMEDGGIV ASDDIHRRIF LPELDDELIT DENPLMSTHW NDLLLETSST 180
PASKVQKPTM QSQIQQPQVV LQQPSPCVEL QPLVRTVSSN NNNNNDSNNN AAAKARMRWT 240
QELHEAFVEA VNQLGGSNKA TPKGVLKHMK VEGLTIYHVK SHLQKYRTYR PEPSEAGSSE 300
TKLTPIEHIT SLDTKRGIDI TEALRIQMEV QKQLHEQLEI QRNMQLRIEE QGKALMMMFE 360
KQNMGFGKPE QGDDETSPEN GSEESDSPPS KRPRKR*
|
| 3D Structure ? help Back to Top |
 |
| PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
| 6j4k_A | 3e-28 | 233 | 290 | 1 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j4k_B | 3e-28 | 233 | 290 | 1 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j5b_A | 3e-28 | 233 | 290 | 1 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j5b_C | 3e-28 | 233 | 290 | 1 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j5b_D | 3e-28 | 233 | 290 | 1 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j5b_F | 3e-28 | 233 | 290 | 1 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j5b_H | 3e-28 | 233 | 290 | 1 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j5b_J | 3e-28 | 233 | 290 | 1 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| Search in ModeBase |
| Functional Description ? help
Back to Top |
| Source |
Description |
| UniProt | Transcription factor involved in male gametophyte development. {ECO:0000269|PubMed:22101548}. |
