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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
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| TF ID |
Thhalv10001986m |
| Common Name | EUTSA_v10001986mg |
| Organism |
|
| Taxonomic ID |
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| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Eutremeae; Eutrema
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| Family |
G2-like |
| Protein Properties |
Length: 443aa MW: 48279 Da PI: 6.5416 |
| Description |
G2-like family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Thhalv10001986m | genome | JGI | View CDS |
|
| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | G2-like | 87.8 | 1e-27 | 168 | 222 | 1 | 56 |
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRla 56
k +++Wt eLH+rFveaveqL G ekA+P++ilelm+v++Lt+++v+SHLQkYR++
Thhalv10001986m 168 KVKVDWTAELHRRFVEAVEQL-GVEKAVPSRILELMGVHCLTRHNVASHLQKYRSH 222
5689*****************.********************************86 PP
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| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0007165 | Biological Process | signal transduction |
| GO:0009658 | Biological Process | chloroplast organization |
| GO:0009910 | Biological Process | negative regulation of flower development |
| GO:0010380 | Biological Process | regulation of chlorophyll biosynthetic process |
| GO:0010638 | Biological Process | positive regulation of organelle organization |
| GO:0045893 | Biological Process | positive regulation of transcription, DNA-templated |
| GO:1900056 | Biological Process | negative regulation of leaf senescence |
| GO:0005634 | Cellular Component | nucleus |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0044212 | Molecular Function | transcription regulatory region DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 443 aa
Download sequence Send
to blast |
MLALSPATNS NSNSNSTREA CDGESSEFLA TSSCGFTIDP EEDFPDFADH GDLLDIIDFD 60
DLFGVAGDVL PDLEIDPEIL AGDFTDHTNA SSTITTTSSS EKTDSLGETY NIKGVSGKGE 120
EVVSKRDDDE TAAVAETVNY DGDNARKRKY SSSRNNRMIT TNNDGKRKVK VDWTAELHRR 180
FVEAVEQLGV EKAVPSRILE LMGVHCLTRH NVASHLQKYR SHRKHLLARE AEAANWTRKR 240
HIYGGLDTTG GAGNIINGRN KNGWLAPAPT LGFPPPPHVA VTPPPVHNLH FRPLHVWGHP 300
TVDHSVMPHV WPKHLPPPST AMATPPPFWV SDSPYWPRIH SGTAPYLPTV ATRFRAPPVA 360
GIPQALHPHH TMYKPDQHGF SSARAPVDLH PSKESVDAAI GDVLTRPWLP LPLGLKPPAV 420
DGVMTELHRH GVSEVPPTTS CA*
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| Functional Description ? help
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| Source |
Description |
| UniProt | Transcriptional activator that functions with GLK2 to promote chloroplast development. Acts as an activator of nuclear photosynthetic genes involved in chlorophyll biosynthesis, light harvesting, and electron transport. Acts in a cell-autonomous manner to coordinate and maintain the photosynthetic apparatus within individual cells. May function in photosynthetic capacity optimization by integrating responses to variable environmental and endogenous cues (PubMed:11828027, PubMed:12220263, PubMed:17533111, PubMed:18643989, PubMed:19376934, PubMed:19383092, PubMed:19726569). Prevents premature senescence (PubMed:23459204). {ECO:0000269|PubMed:11828027, ECO:0000269|PubMed:12220263, ECO:0000269|PubMed:17533111, ECO:0000269|PubMed:18643989, ECO:0000269|PubMed:19376934, ECO:0000269|PubMed:19383092, ECO:0000269|PubMed:19726569, ECO:0000269|PubMed:23459204}. |
| Regulation -- Description ? help
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| Source |
Description |
| UniProt | INDUCTION: By light. Repressed by BZR2. {ECO:0000269|PubMed:12220263, ECO:0000269|PubMed:21214652}. |
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | AK352526 | 0.0 | AK352526.1 Thellungiella halophila mRNA, complete cds, clone: RTFL01-01-C06. |
| Publications
? help Back to Top |
- Leister D,Kleine T
Definition of a core module for the nuclear retrograde response to altered organellar gene expression identifies GLK overexpressors as gun mutants.
Physiol Plant, 2016. 157(3): p. 297-309
[PMID:26876646] - Nagatoshi Y, et al.
GOLDEN 2-LIKE transcription factors for chloroplast development affect ozone tolerance through the regulation of stomatal movement.
Proc. Natl. Acad. Sci. U.S.A., 2016. 113(15): p. 4218-23
[PMID:27035938] - Tokumaru M, et al.
Ubiquitin-Proteasome Dependent Regulation of the GOLDEN2-LIKE 1 Transcription Factor in Response to Plastid Signals.
Plant Physiol., 2017. 173(1): p. 524-535
[PMID:27821720] - Ni F, et al.
Turnip Yellow Mosaic Virus P69 Interacts with and Suppresses GLK Transcription Factors to Cause Pale-Green Symptoms in Arabidopsis.
Mol Plant, 2017. 10(5): p. 764-766
[PMID:27964999] - Wang H,Seo JK,Gao S,Cui X,Jin H
Silencing of AtRAP, a target gene of a bacteria-induced small RNA, triggers antibacterial defense responses through activation of LSU2 and down-regulation of GLK1.
New Phytol., 2017. 215(3): p. 1144-1155
[PMID:28656601]
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