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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
Back to Top |
| TF ID |
Thhalv10000251m |
| Common Name | EUTSA_v10000251mg |
| Organism |
|
| Taxonomic ID |
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| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Eutremeae; Eutrema
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| Family |
bHLH |
| Protein Properties |
Length: 319aa MW: 35258.2 Da PI: 6.7946 |
| Description |
bHLH family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Thhalv10000251m | genome | JGI | View CDS |
|
| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | HLH | 36 | 1.2e-11 | 130 | 176 | 4 | 55 |
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55
h +Er+RR+++ +++ L llP + kK +Ka++Le A++++k+Lq
Thhalv10000251m 130 EHVLAERKRRQKLSERLIALSALLPGL-----KKADKATVLEDAIKHLKHLQ 176
5889***********************.....9******************9 PP
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| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0007029 | Biological Process | endoplasmic reticulum organization |
| GO:0046983 | Molecular Function | protein dimerization activity |
| Sequence ? help Back to Top |
| Protein Sequence Length: 319 aa
Download sequence Send
to blast |
MEDSNFMDLM IDTDEYLIDD WESDFLGETT DHLNTEPGSG SESGSGLKLV SERPTKQMKV 60
NSTSSSPSSS SSGSLTSPRV ISFGSPDPKM NVIETSLNFS NIANMDQKVG SKRKDCGNNG 120
GKREPHLLKE HVLAERKRRQ KLSERLIALS ALLPGLKKAD KATVLEDAIK HLKHLQERVK 180
KLEEERVGIK KMDQSVILVK RSQVYIDDDT SSYSSTCSAG SPPSSSLDEV SILKQTMPMI 240
EARVSDRDLL IRIHCDKNKG CLIKILGSLE KFRLEVVNSF TLQFGNSTLV ITILSKMDNN 300
FARPIEDVVK DIKLALAE*
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| Functional Description ? help
Back to Top |
| Source |
Description |
| UniProt | Transcription activator that regulates the expression of at least NAI2, PYK10 and PBP1. Required for and mediates the formation of endoplasmic reticulum bodies (ER bodies). Involved in the symbiotic interactions with the endophytes of the Sebacinaceae fungus family, such as Piriformospora indica and Sebacina. {ECO:0000269|PubMed:12581307, ECO:0000269|PubMed:15155889, ECO:0000269|PubMed:15919674, ECO:0000269|PubMed:18248598, ECO:0000269|PubMed:18467340, ECO:0000269|PubMed:18780803}. |
| Publications
? help Back to Top |
- Hakenjos JP, et al.
ML3 is a NEDD8- and ubiquitin-modified protein.
Plant Physiol., 2013. 163(1): p. 135-49
[PMID:23903439] - Ding Y, et al.
Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
BMC Plant Biol., 2013. 13: p. 229
[PMID:24377444] - Yoshii M,Yamamoto A,Kagaya Y,Takeda S,Hattori T
The Arabidopsis transcription factor NAI1 is required for enhancing the active histone mark but not for removing the repressive mark on PYK10, a seedling-specific gene upon embryonic-to-postgerminative developmental phase transition.
Plant Signal Behav, 2015. 10(12): p. e1105418
[PMID:26479492]
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