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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Thecc1EG045524t2 |
Common Name | TCM_045524 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Theobroma
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Family |
bZIP |
Protein Properties |
Length: 366aa MW: 39585.9 Da PI: 6.3565 |
Description |
bZIP family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Thecc1EG045524t2 | genome | CGD | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | bZIP_1 | 32.6 | 1.7e-10 | 164 | 212 | 5 | 53 |
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelk 53
kr++r + NR +A rs +RK +i eLe+kv++L++e ++L +l +
Thecc1EG045524t2 164 KRAKRIIANRQSAARSKERKARYISELERKVQTLQTEATTLSAQLTLFQ 212
9****************************************99887655 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 366 aa
Download sequence Send
to blast |
MPDPPSLSPN PDQPIHSNAS STTQTTPSFA NPTTFRGSYH RRAQSEVQFR IPDDLDLVSD 60 PFEGLGSEDD LFCSYMDIEK LGGSSKGADE GGAAGSSSAG SGQNPKGGEE TSGGSGMGEK 120 STGGGKGRHR YSNSVDGCSM MESIEAKKAM APDKLAELWT VDPKRAKRII ANRQSAARSK 180 ERKARYISEL ERKVQTLQTE ATTLSAQLTL FQRDTTGLST ENTELKLRLQ AMEQQAQLRD 240 ALNEALKKEV ERLKIATGEM TTPTDTFNLG MHHIPYTQSS YFPPQPQHVQ VDTHNIQMPQ 300 FHPFQSNMLT PNQSVVAASN SHAYADMMQQ DPLGRLQGLD ISSRGSRLVK SEGPSISAGE 360 HGGTL*
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Functional Description ? help
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Source |
Description |
UniProt | Transcrition factor that may participate with bZIP34 in the gametophytic control of pollen development. {ECO:0000269|PubMed:27896439}. |
Publications
? help Back to Top |
- Duarte JM, et al.
Expression pattern shifts following duplication indicative of subfunctionalization and neofunctionalization in regulatory genes of Arabidopsis. Mol. Biol. Evol., 2006. 23(2): p. 469-78 [PMID:16280546] - Motamayor JC, et al.
The genome sequence of the most widely cultivated cacao type and its use to identify candidate genes regulating pod color. Genome Biol., 2013. 14(6): p. r53 [PMID:23731509] - Pawar V, et al.
A novel family of plant nuclear envelope-associated proteins. J. Exp. Bot., 2016. 67(19): p. 5699-5710 [PMID:27630107] - Gibalová A, et al.
Characterization of pollen-expressed bZIP protein interactions and the role of ATbZIP18 in the male gametophyte. Plant Reprod, 2017. 30(1): p. 1-17 [PMID:27896439] - Ezer D, et al.
The G-Box Transcriptional Regulatory Code in Arabidopsis. Plant Physiol., 2017. 175(2): p. 628-640 [PMID:28864470] - Babiychuk E,Fuangthong M,Van Montagu M,Inzé D,Kushnir S
Efficient gene tagging in Arabidopsis thaliana using a gene trap approach. Proc. Natl. Acad. Sci. U.S.A., 1997. 94(23): p. 12722-7 [PMID:9356517]
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