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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
Thecc1EG045438t1 |
Common Name | TCM_045438 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Theobroma
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Family |
LBD |
Protein Properties |
Length: 220aa MW: 23844.2 Da PI: 8.7998 |
Description |
LBD family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Thecc1EG045438t1 | genome | CGD | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | DUF260 | 135.3 | 2.4e-42 | 43 | 142 | 1 | 100 |
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkae 93
+CaaCk+lrr+Ca++C+++pyf ++p+kfa vhk+FGasnv+k+l ++pe++r da++slvyeA++r+rdPvyG++g i++lqqq+++l+ae
Thecc1EG045438t1 43 PCAACKLLRRRCAQECPFSPYFSPHEPQKFASVHKVFGASNVSKMLMEVPESQRADAANSLVYEANVRLRDPVYGCMGAISALQQQVQSLQAE 135
7******************************************************************************************** PP
DUF260 94 lallkee 100
l+++++e
Thecc1EG045438t1 136 LNAVRAE 142
***9987 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 220 aa
Download sequence Send
to blast |
MSRERERFDE IGKKIKREAD VSSHHMGRRH MLGPPGTLNT ITPCAACKLL RRRCAQECPF 60 SPYFSPHEPQ KFASVHKVFG ASNVSKMLME VPESQRADAA NSLVYEANVR LRDPVYGCMG 120 AISALQQQVQ SLQAELNAVR AEILKYKCRE ANLIPSSHVA LLSSGAVSVA ALPSAPTHPP 180 PPPPPPPLPP TSSSSSMYTQ PTTAADYSTI SNENVSYFG*
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