|
Plant Transcription
Factor Database
|
Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
Thecc1EG041421t3 |
Common Name | TCM_041421 |
Organism |
|
Taxonomic ID |
|
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Theobroma
|
Family |
bZIP |
Protein Properties |
Length: 372aa MW: 41514.7 Da PI: 7.7262 |
Description |
bZIP family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Thecc1EG041421t3 | genome | CGD | View CDS |
|
Signature Domain? help Back to Top |
|
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | bZIP_1 | 34.3 | 5.3e-11 | 67 | 108 | 4 | 45 |
XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
bZIP_1 4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaL 45
k rr+++NReAAr+sR+RKka++++Le+ +L++ ++L
Thecc1EG041421t3 67 AKTLRRLAQNREAARKSRLRKKAYVQQLETSRIKLTQLEQDL 108
6889*************************9877777766665 PP
|
Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 372 aa
Download sequence Send
to blast |
GSSKSGGEST DSGSAVNTLS SKTENQLEPE SPISKKASSS DHQAFDQKPL QHQQHLRGST 60 SEKQLDAKTL RRLAQNREAA RKSRLRKKAY VQQLETSRIK LTQLEQDLQR ARSQGVFLGG 120 CSATVGNISS GAAIFDMEYS RWLEDDQRHM SELRTGLHAH LSDSDLRVIV EGYISHYDEI 180 FRLKGVAAKT DVFHLITGMW TTQAERCFLW MGGFRPSELI KMLISQLDPL TEQQVMGIYS 240 LQHSSQQAEE ALTQGLEQLQ QSLIDTVAGG PGIDAMQQMA VALGKLANLE GFVRQADNLR 300 QQTLHQLPRI LTVRQAARCF LVIGEYYGRL RALSSLWASR PRESLMSDDH SCQTTTDLHM 360 VQPSQNHFSN F*
|
Functional Description ? help
Back to Top |
Source |
Description |
UniProt | Together with TGA10, basic leucine-zipper transcription factor required for anther development, probably via the activation of SPL expression in anthers and via the regulation of genes with functions in early and middle tapetal development (PubMed:20805327). Required for signaling responses to pathogen-associated molecular patterns (PAMPs) such as flg22 that involves chloroplastic reactive oxygen species (ROS) production and subsequent expression of H(2)O(2)-responsive genes (PubMed:27717447). {ECO:0000269|PubMed:20805327, ECO:0000269|PubMed:27717447}. |
Regulation -- Description ? help
Back to Top |
Source |
Description |
UniProt | INDUCTION: Induced by flg22 in leaves. {ECO:0000269|PubMed:27717447}. |
Annotation --
Nucleotide ? help
Back to Top |
Source |
Hit ID |
E-value |
Description |
GenBank | JX587229 | 2e-54 | JX587229.1 Gossypium hirsutum clone NBRI_GE21263 microsatellite sequence. |
Publications
? help Back to Top |
- Motamayor JC, et al.
The genome sequence of the most widely cultivated cacao type and its use to identify candidate genes regulating pod color. Genome Biol., 2013. 14(6): p. r53 [PMID:23731509] - Gutsche N,Zachgo S
The N-Terminus of the Floral Arabidopsis TGA Transcription Factor PERIANTHIA Mediates Redox-Sensitive DNA-Binding. PLoS ONE, 2016. 11(4): p. e0153810 [PMID:27128442] - Noshi M,Mori D,Tanabe N,Maruta T,Shigeoka S
Arabidopsis clade IV TGA transcription factors, TGA10 and TGA9, are involved in ROS-mediated responses to bacterial PAMP flg22. Plant Sci., 2016. 252: p. 12-21 [PMID:27717447] - Ezer D, et al.
The G-Box Transcriptional Regulatory Code in Arabidopsis. Plant Physiol., 2017. 175(2): p. 628-640 [PMID:28864470]
|