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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Thecc1EG036784t1 |
Common Name | TCM_036784 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Theobroma
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Family |
bZIP |
Protein Properties |
Length: 314aa MW: 34747.3 Da PI: 5.1309 |
Description |
bZIP family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Thecc1EG036784t1 | genome | CGD | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | bZIP_1 | 45.4 | 1.8e-14 | 147 | 199 | 4 | 56 |
XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
bZIP_1 4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkev 56
lkr rrk +NRe+ArrsR+RK++ ++ Le +++L +eN++L k+l + ++
Thecc1EG036784t1 147 LKRLRRKLSNRESARRSRKRKQEHLADLELQAEQLRGENDSLYKQLTNAHQQF 199
8******************************************8888776665 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0071333 | Biological Process | cellular response to glucose stimulus |
GO:0005634 | Cellular Component | nucleus |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0042803 | Molecular Function | protein homodimerization activity |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
GO:0046982 | Molecular Function | protein heterodimerization activity |
Sequence ? help Back to Top |
Protein Sequence Length: 314 aa
Download sequence Send
to blast |
MHELVEEMMK QSASELALEE FIRKTMTFSD AKPFPDFDPD TWVAHLSNSF DVFKDHLLHQ 60 EGEAETHVLL LQNLTPNQSS VTATLDSQSS ICENLSSGSP LSGNNPKIRE NEVRGATSGS 120 SHEQSDDEED IETDPGQCEQ SLDPTHLKRL RRKLSNRESA RRSRKRKQEH LADLELQAEQ 180 LRGENDSLYK QLTNAHQQFR DADTNNRVLK SDVEALRAKV KLEEDRLARR TLTCNLNLLQ 240 SHLTSPQPIA THNLRMVANV SPTITVHGED SSYAGLTVSG NSALGLGNVD ISNGNLNSGI 300 GSDAVSGVSE IWR*
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Nucleic Localization
Signal ? help
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No. |
Start |
End |
Sequence |
1 | 146 | 153 | LKRLRRKL |
2 | 150 | 166 | RRKLSNRESARRSRKRK |
3 | 160 | 166 | RRSRKRK |
4 | 160 | 167 | RRSRKRKQ |
5 | 162 | 167 | SRKRKQ |
Functional Description ? help
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Source |
Description |
UniProt | Transcription factor. {ECO:0000250}. |
Regulation -- Description ? help
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Source |
Description |
UniProt | INDUCTION: Repressed by glucose. {ECO:0000269|PubMed:18841482}. |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | JX964183 | 7e-38 | JX964183.1 Gossypium hirsutum clone NBRI_TRANS-452 microsatellite sequence. |
Publications
? help Back to Top |
- Motamayor JC, et al.
The genome sequence of the most widely cultivated cacao type and its use to identify candidate genes regulating pod color. Genome Biol., 2013. 14(6): p. r53 [PMID:23731509] - Ding Y, et al.
Four distinct types of dehydration stress memory genes in Arabidopsis thaliana. BMC Plant Biol., 2013. 13: p. 229 [PMID:24377444] - Ortiz-Espín A, et al.
Mitochondrial AtTrxo1 is transcriptionally regulated by AtbZIP9 and AtAZF2 and affects seed germination under saline conditions. J. Exp. Bot., 2017. 68(5): p. 1025-1038 [PMID:28184497] - Ezer D, et al.
The G-Box Transcriptional Regulatory Code in Arabidopsis. Plant Physiol., 2017. 175(2): p. 628-640 [PMID:28864470] - Pedrotti L, et al.
Snf1-RELATED KINASE1-Controlled C/S1-bZIP Signaling Activates Alternative Mitochondrial Metabolic Pathways to Ensure Plant Survival in Extended Darkness. Plant Cell, 2018. 30(2): p. 495-509 [PMID:29348240]
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