|
Plant Transcription
Factor Database
|
Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
Thecc1EG035897t1 |
Common Name | TCM_035897 |
Organism |
|
Taxonomic ID |
|
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Theobroma
|
Family |
WRKY |
Protein Properties |
Length: 232aa MW: 26061.7 Da PI: 6.278 |
Description |
WRKY family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Thecc1EG035897t1 | genome | CGD | View CDS |
|
Signature Domain? help Back to Top |
|
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | WRKY | 96.9 | 1.3e-30 | 139 | 197 | 1 | 59 |
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59
+dDgy+WrKYG+K vk++++pr+YYrC++agC+vkk+ver++edp++v++tYeg+H+he
Thecc1EG035897t1 139 MDDGYKWRKYGKKRVKNNPNPRNYYRCSTAGCKVKKRVERDKEDPRFVITTYEGKHHHE 197
59********************************************************8 PP
|
Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 232 aa
Download sequence Send
to blast |
MSNSNITTFL AAAAAAVNIP QQTSSPIYSH AVMDDNSTDQ LDFDEDFLIL AADAGEGTNF 60 ETNAPSSSCL KASTTLSQSP FLSSDEMTSS SVNGCWEVPR SSFVDYMQQN GEGYVKTMEM 120 DDHVGFKIAF RTKSDLEIMD DGYKWRKYGK KRVKNNPNPR NYYRCSTAGC KVKKRVERDK 180 EDPRFVITTY EGKHHHESPS ADTDICHNAI NPDQRTSHQL QFLHHHQQHQ P*
|
Annotation --
Nucleotide ? help
Back to Top |
Source |
Hit ID |
E-value |
Description |
GenBank | KF669804 | 2e-68 | KF669804.1 Gossypium hirsutum WRKY transcription factor 113 (WRKY113) mRNA, complete cds. |