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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Thecc1EG029654t1 |
Common Name | TCM_029654 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Theobroma
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Family |
WRKY |
Protein Properties |
Length: 287aa MW: 31421.7 Da PI: 4.7955 |
Description |
WRKY family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Thecc1EG029654t1 | genome | CGD | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | WRKY | 76.6 | 2.9e-24 | 78 | 144 | 2 | 59 |
--SS-EEEEEEE--TT-SS-E........EEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
WRKY 2 dDgynWrKYGqKevkgsefpr........sYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59
+D ++WrKYGqK++kgs++pr +YYrC+s+ gCp++k+vers+ dp++++itY+ eHnh+
Thecc1EG029654t1 78 SDSWAWRKYGQKPIKGSPYPRflfssydrGYYRCSSSkGCPARKQVERSRMDPSMLVITYSCEHNHP 144
69*****************96444444448*****998****************************7 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 287 aa
Download sequence Send
to blast |
MDGSFNKANN PFVSEQQLEE NDNVSSENGS ESPPSTTFND MKLASPKKGR RSIQKRVVSV 60 PIKDVEGSRL KGESAPPSDS WAWRKYGQKP IKGSPYPRFL FSSYDRGYYR CSSSKGCPAR 120 KQVERSRMDP SMLVITYSCE HNHPWPASRN NTAAAKQAAA AAAAAAAAAA TATETTTTTA 180 VKAEPSTSQP DTEPEFGTEE KFADLTDDSI LTTRDEFAWF GEMETTSSTV LESPIFTERD 240 NSVADVAMIF PMREEDESLF ADLGELPECS FVFRHQRNVG PQVGIC*
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Functional Description ? help
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Source |
Description |
UniProt | Transcription factor. Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element (By similarity). {ECO:0000250}. |