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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Thecc1EG026992t1 |
Common Name | TCM_026992 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Theobroma
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Family |
WRKY |
Protein Properties |
Length: 427aa MW: 45364.1 Da PI: 5.0349 |
Description |
WRKY family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Thecc1EG026992t1 | genome | CGD | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | WRKY | 97.9 | 6.8e-31 | 216 | 274 | 2 | 59 |
--SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59
+D ++WrKYGqK++kgs++pr+YYrC+s+ gC+++k+vers++dp++++itY++eHnh+
Thecc1EG026992t1 216 SDLWAWRKYGQKPIKGSPYPRGYYRCSSSkGCSARKQVERSRTDPNMLVITYTSEHNHP 274
699************************998****************************7 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0005634 | Cellular Component | nucleus |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 427 aa
Download sequence Send
to blast |
MGCGSGHGAS DVPASSWQQF PSASDPLNFA SSAMEVDRVK AFGDPFSTMR DPLLHELNVA 60 AAAGSTYFSS PTSTVNDTSN FPGASNTVGH DKIFEDDMRT STPCNIFSRI QISPSSSKLA 120 VSPCDSPPLM AAAGGVGVGV GVSPRGIKAP AVLPSEMINA NSSKGCLIDN TGPLQISSPR 180 NLGIKRRLGK SQAKKVVCIP APAAANSRSS GEVVPSDLWA WRKYGQKPIK GSPYPRGYYR 240 CSSSKGCSAR KQVERSRTDP NMLVITYTSE HNHPWPTQRN ALAGSTRSQP SKNNASSSKS 300 SPSSQPLSSL NSKDELKESS SDALSPAVAA SSTASASVKE EFEDIEKQLD IDDAEFGEGM 360 PQTYRPALPD SQAQSEDFFA DLDEIEADPL NLLFPQGFTE EEQKENKAMD PFSLFDWSSG 420 DNNASF*
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Functional Description ? help
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Source |
Description |
UniProt | Transcription factor. Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element (By similarity). {ECO:0000250}. |