 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
Thecc1EG026958t1 |
| Common Name | TCM_026958 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Theobroma
|
| Family |
FAR1 |
| Protein Properties |
Length: 313aa MW: 35789.3 Da PI: 8.3775 |
| Description |
FAR1 family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Thecc1EG026958t1 | genome | CGD | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | FAR1 | 29.2 | 2.9e-09 | 42 | 97 | 1 | 52 |
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk.....teker 52
+fY++YA +G v k + +++ +ng ++++f Cskeg+r+e+ +k +e +r
Thecc1EG026958t1 42 EFYKAYACAMGLGVHKGSCRRN-KNGIEVMKHFACSKEGHRAEKWEKlenwvREPKR 97
6********************9.566677899***********98886555533333 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 313 aa
Download sequence Send
to blast |
MLTSCRLMES QENNLSDAKY LHELSKDEIL GLEFDDLEDV YEFYKAYACA MGLGVHKGSC 60
RRNKNGIEVM KHFACSKEGH RAEKWEKLEN WVREPKRHIK VVDVYEAKAM KVAGIKTCQV 120
MNVFAAQVGG IQNVGFTRKD FYNRMAAKRH AKVNDGDVQA TLLYFGVKKE IDNGFYMKHT 180
TYDDNKLKNL FWADSISRLD YACFGDVLAY DTTYKKNTFN LPLLVFIGVN HHHMTTIFAL 240
ALLTNEDAES YIWALTTFLE CMMNKKPISV VIDGDRAMRK ALEMVFPGVR HRLCSWHLAR 300
NAQANVPLPG FV*
|
| Annotation --
Nucleotide ? help
Back to Top |
| Source |
Hit ID |
E-value |
Description |
| GenBank | JN127767 | 3e-49 | JN127767.1 Theobroma cacao clone TCC_BB056D20, complete sequence. |
