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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Thecc1EG026903t1 | ||||||||
Common Name | TCM_026903 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Theobroma
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Family | BES1 | ||||||||
Protein Properties | Length: 210aa MW: 22867 Da PI: 8.4887 | ||||||||
Description | BES1 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF822 | 111.3 | 1.6e-34 | 28 | 103 | 2 | 76 |
DUF822 2 gsgrkptwkErEnnkrRERrRRaiaakiyaGLRaqGnyklpkraDnneVlkALcreAGwvvedDGttyr.kgskpl 76 g gr +++ E+E++k RER+RRai++ i+ GLR++G+y+l raD+n+Vl+ L++eAGwvve+DGttyr +++++ Thecc1EG026903t1 28 GRGRGRSEIEKERTKMRERQRRAITTNIFHGLRRHGGYHLFPRADINQVLRQLANEAGWVVEPDGTTYRsVSFSKT 103 568999999************************************************************3233333 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF05687 | 5.8E-32 | 28 | 127 | IPR008540 | BES1/BZR1 plant transcription factor, N-terminal |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
Sequence ? help Back to Top |
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Protein Sequence Length: 210 aa Download sequence Send to blast |
MQQRPQTIAA LICWTAFSFV KEMGEGRGRG RGRSEIEKER TKMRERQRRA ITTNIFHGLR 60 RHGGYHLFPR ADINQVLRQL ANEAGWVVEP DGTTYRSVSF SKTANCCPVC GAMKPITAPT 120 PSSSVVIGGG ECSTTASPRH NPVAAVEDPI RVIDSFCDNL IPIAPYIYGG EDGVSTLALQ 180 QLYPQEAAPP SQCMPPGSPL VRGNKEENI* |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_017979214.1 | 1e-137 | PREDICTED: beta-amylase 7 isoform X1 | ||||
TrEMBL | A0A061G7D3 | 1e-154 | A0A061G7D3_THECC; Beta-amylase 7 | ||||
STRING | EOY25486 | 1e-155 | (Theobroma cacao) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Malvids | OGEM22944 | 3 | 4 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G45880.1 | 5e-19 | beta-amylase 7 |
Link Out ? help Back to Top | |
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Phytozome | Thecc1EG026903t1 |
Entrez Gene | 18595041 |
Publications ? help Back to Top | |||
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