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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
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| TF ID |
Thecc1EG025805t1 |
| Common Name | TCM_025805 |
| Organism |
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| Taxonomic ID |
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| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Theobroma
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| Family |
WOX |
| Protein Properties |
Length: 280aa MW: 30814.9 Da PI: 6.5117 |
| Description |
WOX family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Thecc1EG025805t1 | genome | CGD | View CDS |
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| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | Homeobox | 48.6 | 1.4e-15 | 51 | 111 | 2 | 57 |
T--SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS
Homeobox 2 rkRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57
r+R+t+++eq+ +Le+ F++ +p ++e ++ k l ++ +++V++WFqNrR + ++
Thecc1EG025805t1 51 RSRWTPKPEQILILESIFNSgMVNPPKDETVRIRKLLekfgSVGDANVFYWFQNRRSRSRR 111
89*****************99*************************************997 PP
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| 2 | Wus_type_Homeobox | 107.2 | 9.9e-35 | 50 | 113 | 2 | 65 |
Wus_type_Homeobox 2 artRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65
+r+RWtP+peQi iLe++++sG+++P+k+e+ ri++ Le++G ++d+NVfyWFQNr++R+r++q
Thecc1EG025805t1 50 VRSRWTPKPEQILILESIFNSGMVNPPKDETVRIRKLLEKFGSVGDANVFYWFQNRRSRSRRRQ 113
589***********************************************************97 PP
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| Sequence ? help Back to Top |
| Protein Sequence Length: 280 aa
Download sequence Send
to blast |
MCFVFFSYIL NLGFSFKTIF LLLLFFITVM EDQASDPNSP SHGSERSEPV RSRWTPKPEQ 60
ILILESIFNS GMVNPPKDET VRIRKLLEKF GSVGDANVFY WFQNRRSRSR RRQRQLQASL 120
AGDHQQRNQA QVPGGAIQYE NSTAAMGFAN CPSFANSSPS SFLVGSSSSC GVMGDDGFEN 180
LLSMSGQMGF QEIGQSSSVT SVLCPSETSN LHYQSGFITV FINGVPTEVP RGPLDMKAMF 240
GQDVVLVHSS GVPVPMNEFG FLLQSLQPGE SYFLVSRPT*
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| Functional Description ? help
Back to Top |
| Source |
Description |
| UniProt | Transcription factor which may be involved in developmental processes. {ECO:0000250}. |
| Publications
? help Back to Top |
- Motamayor JC, et al.
The genome sequence of the most widely cultivated cacao type and its use to identify candidate genes regulating pod color.
Genome Biol., 2013. 14(6): p. r53
[PMID:23731509] - Hu X,Xu L
Transcription Factors WOX11/12 Directly Activate WOX5/7 to Promote Root Primordia Initiation and Organogenesis.
Plant Physiol., 2016. 172(4): p. 2363-2373
[PMID:27784768] - Sheng L, et al.
Non-canonical WOX11-mediated root branching contributes to plasticity in Arabidopsis root system architecture.
Development, 2017. 144(17): p. 3126-3133
[PMID:28743799] - Liu J, et al.
The WOX11-LBD16 Pathway Promotes Pluripotency Acquisition in Callus Cells During De Novo Shoot Regeneration in Tissue Culture.
Plant Cell Physiol., 2018. 59(4): p. 734-743
[PMID:29361138] - Baesso B, et al.
Transcription factors PRE3 and WOX11 are involved in the formation of new lateral roots from secondary growth taproot in A. thaliana.
Plant Biol (Stuttg), 2018. 20(3): p. 426-432
[PMID:29450949]
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