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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Thecc1EG021400t1 |
Common Name | TCM_021400 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Theobroma
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Family |
WRKY |
Protein Properties |
Length: 362aa MW: 39622 Da PI: 6.5184 |
Description |
WRKY family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Thecc1EG021400t1 | genome | CGD | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | WRKY | 106.6 | 1.3e-33 | 200 | 258 | 1 | 59 |
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59
ldDgy+WrKYGqK vk+s++prsYYrCtsagC vkk+vers++dp+vv++tYeg+H+h+
Thecc1EG021400t1 200 LDDGYRWRKYGQKAVKNSPYPRSYYRCTSAGCGVKKRVERSSDDPTVVVTTYEGQHTHP 258
59********************************************************8 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0010200 | Biological Process | response to chitin |
GO:0042742 | Biological Process | defense response to bacterium |
GO:0045893 | Biological Process | positive regulation of transcription, DNA-templated |
GO:0005634 | Cellular Component | nucleus |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 362 aa
Download sequence Send
to blast |
MEKKKPEGEK RENSMANLRF SDENPAASGF GGSIFDMAAG ACEGSGGDKW GTLGFMDLLG 60 IHQDFAAPSL FDSFQPPILS SSPPPPPPPS SSELHQEILH ELQLENKQLI QKQQQLQGLP 120 SPASTVPESS EVLNNPATPN SSSISSSSNE AANDEQTKTG DDEEQDQDKT KKQLKPKKKN 180 QKRQREPRFA FMTKSEVDHL DDGYRWRKYG QKAVKNSPYP RSYYRCTSAG CGVKKRVERS 240 SDDPTVVVTT YEGQHTHPCP ITPRGSIGIS PDSSTFGAAS AASFIVPQPQ YLHQQQPYIY 300 TSLPPLNITT ATATSSSFIN PSFPAFLQER RVAPPSASSL RDHGLLQDIV PSQMRNEAKE 360 E*
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Functional Description ? help
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Source |
Description |
UniProt | Transcription factor. Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element (By similarity). {ECO:0000250}. |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | JN609590 | 1e-130 | JN609590.1 Gossypium hirsutum WRKY48 mRNA, complete cds. |
GenBank | KF669855 | 1e-130 | KF669855.1 Gossypium hirsutum WRKY transcription factor 95 (WRKY95) mRNA, complete cds. |