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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Thecc1EG018667t1 |
Common Name | TCM_018667 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Theobroma
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Family |
WRKY |
Protein Properties |
Length: 521aa MW: 56458.9 Da PI: 8.1607 |
Description |
WRKY family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Thecc1EG018667t1 | genome | CGD | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | WRKY | 101.6 | 4.7e-32 | 234 | 291 | 2 | 60 |
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS-- CS
WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhek 60
+DgynWrKYGqK++kg e+prsYY+Ct+ +C+vkkkversa d++++ei+Y+g Hnhek
Thecc1EG018667t1 234 EDGYNWRKYGQKPIKGCEYPRSYYKCTHLNCSVKKKVERSA-DGQITEIIYKGAHNHEK 291
8****************************************.***************85 PP
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2 | WRKY | 107.2 | 8e-34 | 406 | 464 | 1 | 59 |
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59
ldDgy+WrKYGqK+vkg+++prsYY+CtsagC+v+k+ver+++dpk+v++tYeg+Hnh+
Thecc1EG018667t1 406 LDDGYRWRKYGQKVVKGNPHPRSYYKCTSAGCNVRKHVERASTDPKAVITTYEGKHNHD 464
59********************************************************7 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0031347 | Biological Process | regulation of defense response |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 521 aa
Download sequence Send
to blast |
MAEREAEQGT RSKLSALTRP TITLPPRPAM DGLFSSGSGL SPGPMTLVSA FFSDPDSTEH 60 KSFSQLLAGA MASPGARLPY NSMDGLFMEV GFKDGAEKSA GFKQSRPLNL AVARSPLFTV 120 PPGISPSGLL NSPGFFPLSP QSPFGISHQQ ALAQVTAQAA LAQSHVRAQA EYQTLSVAAP 180 SESLIHHPSF NSEETSQQMP PAASDPQSSA IEYSEASQSD RKNQPSVAVD KPAEDGYNWR 240 KYGQKPIKGC EYPRSYYKCT HLNCSVKKKV ERSADGQITE IIYKGAHNHE KPQPNKQGKG 300 GNDGNSISQA NSELGSQGVA GNLNKLSEIV PTHSIPRKNH ESAQVAVEIP SESEEGCDEE 360 SREERDDDEP NPKRRNAAGE SAVVLSHKTV TESKIIVQTR SEVDLLDDGY RWRKYGQKVV 420 KGNPHPRSYY KCTSAGCNVR KHVERASTDP KAVITTYEGK HNHDVPAARN SSHTAVNNSL 480 PQPKPHKVVA EGHSLLQKMD FLNNAQGPAV LRLKEEQIRV *
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Functional Description ? help
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Source |
Description |
UniProt | Transcription factor. Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element (By similarity). {ECO:0000250}. |
Regulation -- Description ? help
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Source |
Description |
UniProt | INDUCTION: By salicylic acid and during leaf senescence. {ECO:0000269|PubMed:11449049, ECO:0000269|PubMed:11722756}. |