 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
Thecc1EG012077t2 |
| Common Name | TCM_012077 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Theobroma
|
| Family |
Dof |
| Protein Properties |
Length: 375aa MW: 41421.6 Da PI: 7.0745 |
| Description |
Dof family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Thecc1EG012077t2 | genome | CGD | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | zf-Dof | 127.4 | 4.1e-40 | 119 | 179 | 2 | 62 |
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62
+++alkcprCdst+tkfCyynnyslsqPryfCk+CrryWtkGG+lrn+PvGgg+rknkk+
Thecc1EG012077t2 119 HDQALKCPRCDSTHTKFCYYNNYSLSQPRYFCKTCRRYWTKGGTLRNIPVGGGCRKNKKVA 179
6899******************************************************975 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0010067 | Biological Process | procambium histogenesis |
| GO:0010087 | Biological Process | phloem or xylem histogenesis |
| GO:0045893 | Biological Process | positive regulation of transcription, DNA-templated |
| GO:0005634 | Cellular Component | nucleus |
| GO:0016021 | Cellular Component | integral component of membrane |
| GO:0003677 | Molecular Function | DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 375 aa
Download sequence Send
to blast |
FTANSLADTN HFNPWISLSH LFSSSSLFFC TLVPLSQVLV KRERLLSREQ LFSFEYLAFC 60
LCWVGFVSMG LTSLQVCMDS SDWLQGTIHE ESGMDSSSPS GDMLACSRPL IERRLRPPHD 120
QALKCPRCDS THTKFCYYNN YSLSQPRYFC KTCRRYWTKG GTLRNIPVGG GCRKNKKVAS 180
KKSNDQSANS NNPGSSSHNP TDLHLSFPEM NLSHLNNMLG THGANNNFME SKYNSLLENP 240
RPIDFMESKL EAIVGSSRNY DFMGNGELGM VGGLGDMGHG LAPNLHGLCS PYGMSLDGNG 300
GTFLDTCQRI MLPYDANADQ HAVDVKPNTK LLSLDWQDQG CSDAGKDTYG YLNNLGSWSG 360
MMNNYGPSTT NPLV*
|
| Functional Description ? help
Back to Top |
| Source |
Description |
| UniProt | Transcription factor that binds specifically to a 5'-AA[AG]G-3' consensus core sequence (By similarity). Promotes expression (PubMed:19915089). The PEAR proteins (e.g. DOF2.4, DOF5.1, DOF3.2, DOF1.1, DOF5.6 and DOF5.3) activate gene expression that promotes radial growth of protophloem sieve elements (PubMed:30626969). Involved in the regulation of interfascicular cambium formation and vascular tissue development, particularly at a very early stage during inflorescence stem development; promotes both cambium activity and phloem specification, but prevents xylem specification (PubMed:19915089). {ECO:0000250|UniProtKB:Q9M2U1, ECO:0000269|PubMed:19915089, ECO:0000269|PubMed:30626969}. |
