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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Thecc1EG011624t3 |
Common Name | TCM_011624 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Theobroma
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Family |
WRKY |
Protein Properties |
Length: 374aa MW: 39536.4 Da PI: 6.8 |
Description |
WRKY family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Thecc1EG011624t3 | genome | CGD | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | WRKY | 110.2 | 9.5e-35 | 243 | 299 | 2 | 59 |
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59
dDgynWrKYGqK+vkgsefprsYY+Ct++gCpvkkkvers d++v+ei+Y+g+Hnh+
Thecc1EG011624t3 243 DDGYNWRKYGQKQVKGSEFPRSYYKCTHPGCPVKKKVERSL-DGQVTEIIYKGQHNHQ 299
8****************************************.***************8 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 374 aa
Download sequence Send
to blast |
MAESQEQQHQ PSKTVASQRP TITPPPRPFT EALFNGGSGM MGFSPGPMTL VSNFFSDTDE 60 FKSFSQLLAG AMASPAAAAA AQRPNFPAPP PTTTTEEQGD VSGAVGAGDT GLRFRQNKPA 120 GLVIAQPPPM FTVPPGLSPA SLLESPGFSV FSPGAQGPFG MTHQQALAQV TAQAAQAQMQ 180 ADYSSAPAAS LAQVSSFTAS TTTNQQIPTS LPDSSVTRKE PSRVSHSDPR SQPASFIVDK 240 PADDGYNWRK YGQKQVKGSE FPRSYYKCTH PGCPVKKKVE RSLDGQVTEI IYKGQHNHQP 300 PQSNKRAKDS GSLNGNPNNQ GNSESASQHQ GGNLNILKEG TSAYSMSKKD HESSQATAEH 360 LSGTSDSEEA GDNE
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Functional Description ? help
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Source |
Description |
UniProt | Transcription factor that binds specifically to the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element. Has a positive role in resistance to necrotrophic pathogens (e.g. Botrytis cinerea), but a negative effect on plant resistance to biotrophic pathogens (e.g. Pseudomonas syringae). {ECO:0000269|PubMed:18570649, ECO:0000269|PubMed:22219184}. |
Regulation -- Description ? help
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Source |
Description |
UniProt | INDUCTION: By biotic and abiotic stresses such as pathogen infection (e.g. Botrytis cinerea and Pseudomonas syringae), salicylic acid (SA), jasmonic acid (JA), ethylene (ACC), liquid infiltration or spraying, and strongly during leaf senescence. {ECO:0000269|PubMed:11449049, ECO:0000269|PubMed:11722756, ECO:0000269|PubMed:18570649}. |