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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Thecc1EG011624t1 |
Common Name | TCM_011624 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Theobroma
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Family |
WRKY |
Protein Properties |
Length: 565aa MW: 61013.3 Da PI: 7.8816 |
Description |
WRKY family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Thecc1EG011624t1 | genome | CGD | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | WRKY | 109.4 | 1.7e-34 | 278 | 334 | 2 | 59 |
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59
dDgynWrKYGqK+vkgsefprsYY+Ct++gCpvkkkvers d++v+ei+Y+g+Hnh+
Thecc1EG011624t1 278 DDGYNWRKYGQKQVKGSEFPRSYYKCTHPGCPVKKKVERSL-DGQVTEIIYKGQHNHQ 334
8****************************************.***************8 PP
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2 | WRKY | 107.3 | 7.6e-34 | 457 | 515 | 1 | 59 |
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59
ldDgy+WrKYGqK+vkg+++prsYY+Ct++gC+v+k+ver+++dpk+v++tYeg+Hnh+
Thecc1EG011624t1 457 LDDGYRWRKYGQKVVKGNPYPRSYYKCTTPGCNVRKHVERASTDPKAVITTYEGKHNHD 515
59********************************************************7 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 565 aa
Download sequence Send
to blast |
MAESQEQQHQ PSKTVASQRP TITPPPRPFT EALFNGGSGM MGFSPGPMTL VSNFFSDTDE 60 FKSFSQLLAG AMASPAAAAA AQRPNFPAPP PTTTTEEQGD VSGAVGAGDT GLRFRQNKPA 120 GLVIAQPPPM FTVPPGLSPA SLLESPGFSV FSPGAQEHTI FAILIYPLIP FVCCIVRSVC 180 ESSRASTRTE KGPFGMTHQQ ALAQVTAQAA QAQMQADYSS APAASLAQVS SFTASTTTNQ 240 QIPTSLPDSS VTRKEPSRVS HSDPRSQPAS FIVDKPADDG YNWRKYGQKQ VKGSEFPRSY 300 YKCTHPGCPV KKKVERSLDG QVTEIIYKGQ HNHQPPQSNK RAKDSGSLNG NPNNQGNSES 360 ASQHQGGNLN ILKEGTSAYS MSKKDHESSQ ATAEHLSGTS DSEEAGDNET VADEKDEDEP 420 DPKRRSTEYR VSEPASSHRT VTEPRIIVQT TSEVDLLDDG YRWRKYGQKV VKGNPYPRSY 480 YKCTTPGCNV RKHVERASTD PKAVITTYEG KHNHDVPAAK TSSHNTANSN ASQVRTQTVT 540 NSADFGNNSQ QRVAHLRLKE EQIT*
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Functional Description ? help
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Source |
Description |
UniProt | Transcription factor. Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element (By similarity). {ECO:0000250}. |
Regulation -- Description ? help
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Source |
Description |
UniProt | INDUCTION: By salicylic acid and during leaf senescence. {ECO:0000269|PubMed:11449049, ECO:0000269|PubMed:11722756}. |