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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Thecc1EG011578t2 |
Common Name | TCM_011578 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Theobroma
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Family |
WRKY |
Protein Properties |
Length: 305aa MW: 32945.2 Da PI: 6.4065 |
Description |
WRKY family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Thecc1EG011578t2 | genome | CGD | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | WRKY | 101.2 | 6.1e-32 | 164 | 221 | 2 | 59 |
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59
+Dgy+WrKYGqK vk+s++prsYYrCt ++C+vkk+vers+edp++v++tYeg+H h+
Thecc1EG011578t2 164 EDGYRWRKYGQKAVKNSPYPRSYYRCTNSKCTVKKRVERSSEDPTTVITTYEGQHCHH 221
8******************************************************997 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0009414 | Biological Process | response to water deprivation |
GO:0009651 | Biological Process | response to salt stress |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
GO:0044212 | Molecular Function | transcription regulatory region DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 305 aa
Download sequence Send
to blast |
MEDKEGADPR NEFTSDSSWT LPGPDPVSDS VNYFFDRESS ILSEFGWNLQ PDQAEEIERF 60 GELDRTATRP DLAGNFSGSQ SSGAAAAAAA GSGSGTATNL SGSADVSTSN PSVSSSSSED 120 PPEKSTGSGG KPPEIPSKVR KKGQKRIRQP RFAFVTKSEV DHLEDGYRWR KYGQKAVKNS 180 PYPRSYYRCT NSKCTVKKRV ERSSEDPTTV ITTYEGQHCH HSVGFPRGGL ISHEAAFAGQ 240 LTPAISQFYY PGVQLHREIP PSITQSHQVP IDVGGSRALP EPTPQLPTDE GLLGDIVPPG 300 MRNR*
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Functional Description ? help
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Source |
Description |
UniProt | Transcription factor. Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element (By similarity). {ECO:0000250}. |
Publications
? help Back to Top |
- Motamayor JC, et al.
The genome sequence of the most widely cultivated cacao type and its use to identify candidate genes regulating pod color. Genome Biol., 2013. 14(6): p. r53 [PMID:23731509] - Ding Y, et al.
Four distinct types of dehydration stress memory genes in Arabidopsis thaliana. BMC Plant Biol., 2013. 13: p. 229 [PMID:24377444] - Jiang Y,Qiu Y,Hu Y,Yu D
Heterologous Expression of AtWRKY57 Confers Drought Tolerance in Oryza sativa. Front Plant Sci, 2016. 7: p. 145 [PMID:26904091] - Jiang Y,Yu D
The WRKY57 Transcription Factor Affects the Expression of Jasmonate ZIM-Domain Genes Transcriptionally to Compromise Botrytis cinerea Resistance. Plant Physiol., 2016. 171(4): p. 2771-82 [PMID:27268959] - Huang KC,Lin WC,Cheng WH
Salt hypersensitive mutant 9, a nucleolar APUM23 protein, is essential for salt sensitivity in association with the ABA signaling pathway in Arabidopsis. BMC Plant Biol., 2018. 18(1): p. 40 [PMID:29490615]
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