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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
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| TF ID |
Thecc1EG008255t4 |
| Common Name | TCM_008255 |
| Organism |
|
| Taxonomic ID |
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| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Theobroma
|
| Family |
VOZ |
| Protein Properties |
Length: 454aa MW: 50366.5 Da PI: 5.3796 |
| Description |
VOZ family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Thecc1EG008255t4 | genome | CGD | View CDS |
|
| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | VOZ | 437.3 | 2.1e-134 | 206 | 423 | 1 | 217 |
VOZ 1 pppsaflgpkcalwdctrpaqgsewlqdycssfhatlalneglpgttpvlrpkgidlkdgllfaalsakvqgkevgipecegaatakspwna. 92
pppsaf+gpkcalwdctrpaqgs+w+ dycssfhatlalne++pg+tp+lrp+gi+lkd+ll++al+ak+qgk+vgip+cegaat+kspwna
Thecc1EG008255t4 206 PPPSAFMGPKCALWDCTRPAQGSDWYYDYCSSFHATLALNEDPPGMTPILRPGGISLKDNLLLDALRAKTQGKNVGIPQCEGAATMKSPWNAt 298
89*****************************************************************************************95 PP
VOZ 93 aelfdlsllegetirewlffdkprrafesgnrkqrslpdysgrgwhesrkqvmkefgglkrsyymdpqpsssfewhlyeyeineldalalyrl 185
aelfdlsllege irewlffdkprrafesgnrkqrslpdysgrgwhesrkqvmkefgg+krsyymdpqps+++ewhl+eyei+ +da+alyrl
Thecc1EG008255t4 299 AELFDLSLLEGEIIREWLFFDKPRRAFESGNRKQRSLPDYSGRGWHESRKQVMKEFGGQKRSYYMDPQPSGQYEWHLFEYEIYGCDAFALYRL 391
69******************************************************************************************* PP
VOZ 186 elklvdekksakgkvskdsladlqkklgrlta 217
elkl++ekks+k kvskdsladlqkk+grlta
Thecc1EG008255t4 392 ELKLANEKKSPKVKVSKDSLADLQKKMGRLTA 423
******************************97 PP
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| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0045893 | Biological Process | positive regulation of transcription, DNA-templated |
| GO:0048578 | Biological Process | positive regulation of long-day photoperiodism, flowering |
| GO:0005634 | Cellular Component | nucleus |
| GO:0005737 | Cellular Component | cytoplasm |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 454 aa
Download sequence Send
to blast |
MQNNSKNKCI SASHQLMVDN AKNRLNNLQE RFTDLQAARK EGRAGDVAVL EEQVYQSLRE 60
WKAELCAPSP ATSLLGGSLG SFSDDINRLL QLYEEEDDAS SPLKGPAVLK PETDVQSLNP 120
CNLPVVPEDY LVNHELQQHG LQGFDPCKVS TSALETTAVG NDINYQLDYH PFDLQQEFDH 180
GPLIGANGTE DCVKDASPNI LPNVSPPPSA FMGPKCALWD CTRPAQGSDW YYDYCSSFHA 240
TLALNEDPPG MTPILRPGGI SLKDNLLLDA LRAKTQGKNV GIPQCEGAAT MKSPWNATAE 300
LFDLSLLEGE IIREWLFFDK PRRAFESGNR KQRSLPDYSG RGWHESRKQV MKEFGGQKRS 360
YYMDPQPSGQ YEWHLFEYEI YGCDAFALYR LELKLANEKK SPKVKVSKDS LADLQKKMGR 420
LTAEVPGDDR SPGKGKTKAS KKADARNVSS AQD*
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| Functional Description ? help
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| Source |
Description |
| UniProt | Transcriptional activator acting positively in the phytochrome B signaling pathway. Functions redundantly with VOZ2 to promote flowering downstream of phytochrome B (phyB). Down-regulates 'FLOWERING LOCUS C' (FLC) and up-regulates 'FLOWERING LOCUS T' (FT). Binds to the 38-bp cis-acting region of the AVP1 gene. Interacts with phyB in the cytoplasm and is translocated to the nucleus at signal transmission, where it is subjected to degradation in a phytochrome-dependent manner. {ECO:0000269|PubMed:15295067, ECO:0000269|PubMed:22904146}. |
| Regulation -- Description ? help
Back to Top |
| Source |
Description |
| UniProt | INDUCTION: By far-red light. {ECO:0000269|PubMed:22904146}. |
| Publications
? help Back to Top |
- Motamayor JC, et al.
The genome sequence of the most widely cultivated cacao type and its use to identify candidate genes regulating pod color.
Genome Biol., 2013. 14(6): p. r53
[PMID:23731509] - Ding Y, et al.
Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
BMC Plant Biol., 2013. 13: p. 229
[PMID:24377444] - Yasui Y,Kohchi T
VASCULAR PLANT ONE-ZINC FINGER1 and VOZ2 repress the FLOWERING LOCUS C clade members to control flowering time in Arabidopsis.
Biosci. Biotechnol. Biochem., 2014. 78(11): p. 1850-5
[PMID:25351333] - Kumar S,Choudhary P,Gupta M,Nath U
VASCULAR PLANT ONE-ZINC FINGER1 (VOZ1) and VOZ2 Interact with CONSTANS and Promote Photoperiodic Flowering Transition.
Plant Physiol., 2018. 176(4): p. 2917-2930
[PMID:29507119] - Song C,Lee J,Kim T,Hong JC,Lim CO
VOZ1, a transcriptional repressor of DREB2C, mediates heat stress responses in Arabidopsis.
Planta, 2018. 247(6): p. 1439-1448
[PMID:29536220]
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