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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
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| TF ID |
Thecc1EG008193t1 |
| Common Name | TCM_008193 |
| Organism |
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| Taxonomic ID |
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| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Theobroma
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| Family |
G2-like |
| Protein Properties |
Length: 427aa MW: 46915.8 Da PI: 6.4402 |
| Description |
G2-like family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Thecc1EG008193t1 | genome | CGD | View CDS |
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| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | G2-like | 88 | 9.2e-28 | 153 | 207 | 1 | 56 |
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRla 56
k +++WtpeLH+rFv+aveqL G +kA+P++ilelm++++Lt+++++SHLQkYR++
Thecc1EG008193t1 153 KVKVDWTPELHRRFVQAVEQL-GVDKAVPSRILELMGIDCLTRHNIASHLQKYRSH 207
5689*****************.********************************86 PP
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| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0007165 | Biological Process | signal transduction |
| GO:0009658 | Biological Process | chloroplast organization |
| GO:0009910 | Biological Process | negative regulation of flower development |
| GO:0010380 | Biological Process | regulation of chlorophyll biosynthetic process |
| GO:0010638 | Biological Process | positive regulation of organelle organization |
| GO:0045893 | Biological Process | positive regulation of transcription, DNA-templated |
| GO:1900056 | Biological Process | negative regulation of leaf senescence |
| GO:0005634 | Cellular Component | nucleus |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0044212 | Molecular Function | transcription regulatory region DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 427 aa
Download sequence Send
to blast |
MLAVSPLRNT TNDENKGEME SFTISSEEFP DFADGNLLES IDFDDLFVSI NEGDMLPDLE 60
MDPEIIAELP TNGSEESEMN TSIDKTDEDN NQRKEEEDKV SGSGSGLGSS SSKGEEIVSK 120
REEPTAVKTP TKDADKGRKS SLQAKNNNQG KRKVKVDWTP ELHRRFVQAV EQLGVDKAVP 180
SRILELMGID CLTRHNIASH LQKYRSHRKH LLAREAEAAS WTHRRQMYGA ATPAGGGKRD 240
MNPWLAPTMG FPPMSPMHHH HHFRPLHVWG HPTVDQSLMH LWPKHLAHTP SPSPPPPPTW 300
GPHPPPADPS YWHHHDQRVP NGLTPGTPCF PQPLAPTRFA APPVPGIPPH HPMYKADPGI 360
GVPAGQSGPH PLIDFHPSKE SIDAAIEDVL SKPWLPLPLG LKPPSTDSVL GELQRQGVPK 420
VPPSCA*
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| Functional Description ? help
Back to Top |
| Source |
Description |
| UniProt | Transcriptional activator that functions with GLK2 to promote chloroplast development. Acts as an activator of nuclear photosynthetic genes involved in chlorophyll biosynthesis, light harvesting, and electron transport. Acts in a cell-autonomous manner to coordinate and maintain the photosynthetic apparatus within individual cells. May function in photosynthetic capacity optimization by integrating responses to variable environmental and endogenous cues (PubMed:11828027, PubMed:12220263, PubMed:17533111, PubMed:18643989, PubMed:19376934, PubMed:19383092, PubMed:19726569). Prevents premature senescence (PubMed:23459204). {ECO:0000269|PubMed:11828027, ECO:0000269|PubMed:12220263, ECO:0000269|PubMed:17533111, ECO:0000269|PubMed:18643989, ECO:0000269|PubMed:19376934, ECO:0000269|PubMed:19383092, ECO:0000269|PubMed:19726569, ECO:0000269|PubMed:23459204}. |
| Regulation -- Description ? help
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| Source |
Description |
| UniProt | INDUCTION: By light. Repressed by BZR2. {ECO:0000269|PubMed:12220263, ECO:0000269|PubMed:21214652}. |
| Publications
? help Back to Top |
- Motamayor JC, et al.
The genome sequence of the most widely cultivated cacao type and its use to identify candidate genes regulating pod color.
Genome Biol., 2013. 14(6): p. r53
[PMID:23731509] - Leister D,Kleine T
Definition of a core module for the nuclear retrograde response to altered organellar gene expression identifies GLK overexpressors as gun mutants.
Physiol Plant, 2016. 157(3): p. 297-309
[PMID:26876646] - Nagatoshi Y, et al.
GOLDEN 2-LIKE transcription factors for chloroplast development affect ozone tolerance through the regulation of stomatal movement.
Proc. Natl. Acad. Sci. U.S.A., 2016. 113(15): p. 4218-23
[PMID:27035938] - Tokumaru M, et al.
Ubiquitin-Proteasome Dependent Regulation of the GOLDEN2-LIKE 1 Transcription Factor in Response to Plastid Signals.
Plant Physiol., 2017. 173(1): p. 524-535
[PMID:27821720] - Ni F, et al.
Turnip Yellow Mosaic Virus P69 Interacts with and Suppresses GLK Transcription Factors to Cause Pale-Green Symptoms in Arabidopsis.
Mol Plant, 2017. 10(5): p. 764-766
[PMID:27964999] - Wang H,Seo JK,Gao S,Cui X,Jin H
Silencing of AtRAP, a target gene of a bacteria-induced small RNA, triggers antibacterial defense responses through activation of LSU2 and down-regulation of GLK1.
New Phytol., 2017. 215(3): p. 1144-1155
[PMID:28656601]
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