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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Thecc1EG007789t1 | ||||||||
Common Name | TCM_007789 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Theobroma
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Family | GeBP | ||||||||
Protein Properties | Length: 134aa MW: 14635 Da PI: 10.3517 | ||||||||
Description | GeBP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF573 | 31.8 | 4e-10 | 84 | 121 | 4 | 41 |
DUF573 4 qrlwseeDeivlLqGlidfkaktgkspsddidafyefv 41 +lws Dei+lL+G++++k k+g++p++d ++f+ Thecc1EG007789t1 84 PQLWSAADEIALLKGIMEYKLKKGSDPYEDSSEFMISS 121 579******************************98665 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 134 aa Download sequence Send to blast |
MVGKQPIENL HGSDSKSDSN KSFPSLNIFD FTIKPILTLP QKSTLKSTPK PKLIASIESS 60 LKRKKPPLSG SNGDAGNVKI LKTPQLWSAA DEIALLKGIM EYKLKKGSDP YEDSSEFMIS 120 SNNRSKLMCP RIN* |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_022725846.1 | 4e-19 | STOREKEEPER protein-like | ||||
TrEMBL | A0A061E2G7 | 1e-89 | A0A061E2G7_THECC; Uncharacterized protein | ||||
STRING | EOX99194 | 2e-90 | (Theobroma cacao) |
Link Out ? help Back to Top | |
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Phytozome | Thecc1EG007789t1 |
Entrez Gene | 18608542 |
Publications ? help Back to Top | |||
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