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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Thecc1EG004187t1 |
Common Name | TCM_004187 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Theobroma
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Family |
WRKY |
Protein Properties |
Length: 353aa MW: 39415.4 Da PI: 10.1444 |
Description |
WRKY family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Thecc1EG004187t1 | genome | CGD | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | WRKY | 99.3 | 2.4e-31 | 287 | 344 | 3 | 59 |
-SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
WRKY 3 DgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59
D y+WrKYGqK++kgs++pr+YY+C+s gCp++k+ver+ e+p+++++tYegeHnh+
Thecc1EG004187t1 287 DDYSWRKYGQKPIKGSPHPRGYYKCSSMrGCPARKHVERCLEEPSMLIVTYEGEHNHP 344
99***********************9988****************************8 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0005516 | Molecular Function | calmodulin binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 353 aa
Download sequence Send
to blast |
MEEVEDANKA AVESCHRVLS ILSQPQDQVH YRNLMAETGE AVFRFKRVVS LLNAGLGHAR 60 VRKLRKLQTP FPQSILLDNP HHTATDYPSK NLQLGYHESS VQELSSHAKT SLYLGNPSLE 120 LSSNGKNPLQ VAQQGPSGHY LYLQQQQLQQ RLQLQQQQQQ QQQQQQQQMK HQAEMMFRKR 180 NSGINLNFDS SSCTPTRSST RSFISSLSID GSVANLDGGS AFNLIGAPRS SDQGSQPKKK 240 CSARGEDGSV KCGSSGRCHC SKKRKHRVKR SIKVPAISSK LADIPPDDYS WRKYGQKPIK 300 GSPHPRGYYK CSSMRGCPAR KHVERCLEEP SMLIVTYEGE HNHPRLPSQS TT*
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Functional Description ? help
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Source |
Description |
UniProt | Transcription factor. Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element (By similarity). {ECO:0000250}. |
Regulation -- Description ? help
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Source |
Description |
UniProt | INDUCTION: By salicylic acid. {ECO:0000269|PubMed:11449049}. |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | KF669800 | 0.0 | KF669800.1 Gossypium hirsutum WRKY transcription factor 111 (WRKY111) mRNA, complete cds. |