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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Thecc1EG002318t3 |
Common Name | TCM_002318 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Theobroma
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Family |
WRKY |
Protein Properties |
Length: 504aa MW: 54950.9 Da PI: 6.5998 |
Description |
WRKY family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Thecc1EG002318t3 | genome | CGD | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | WRKY | 97.9 | 6.4e-31 | 107 | 164 | 2 | 60 |
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS-- CS
WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhek 60
+DgynWrKYGqK vkg+ef rsYY+Ct+++C vkk++ers+ d+k+v+++Y g+H+h+k
Thecc1EG002318t3 107 EDGYNWRKYGQKLVKGNEFVRSYYKCTHPNCLVKKQLERSH-DGKMVDTVYFGQHDHPK 164
7****************************************.***************85 PP
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2 | WRKY | 103.4 | 1.2e-32 | 281 | 339 | 1 | 59 |
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59
++Dgy+WrKYGqK vkg+++prsYYrC+ +gCpvkk+ver+++d k+v++tYeg+H+h+
Thecc1EG002318t3 281 VNDGYRWRKYGQKLVKGNPNPRSYYRCSNPGCPVKKHVERDSHDVKLVITTYEGRHDHD 339
58********************************************************7 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0009863 | Biological Process | salicylic acid mediated signaling pathway |
GO:0045893 | Biological Process | positive regulation of transcription, DNA-templated |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0008270 | Molecular Function | zinc ion binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 504 aa
Download sequence Send
to blast |
MVSSGECITD EVGTDKLQSP DAGNHALQQI SDSKVHLPQS NQGGETPSIK SEKAPLPDSM 60 VQTSKSEQGG NVSCMISNKT SVTPDMTPSP LPGTEGSTPI VREKASEDGY NWRKYGQKLV 120 KGNEFVRSYY KCTHPNCLVK KQLERSHDGK MVDTVYFGQH DHPKPLNLPV AVGVVVSVVE 180 EKPYNASPTV VKDKSSDARS QTPCQIEPQD DFRPLAIAAS ENVKGAPSKS IRIQNVADSD 240 DDHVISKRRK KENSNADASP VEKQTTESRM VVKTLSEVDI VNDGYRWRKY GQKLVKGNPN 300 PRSYYRCSNP GCPVKKHVER DSHDVKLVIT TYEGRHDHDI PPTRTVTHNT TGVNVHSAAH 360 NDESGTKVEE SETACVDMVV HSSSGLENKS SEQLNGESTT KSEASGAVCV DVVEAPISGP 420 ESGSNEQRSG KLQPSKRSKG DGNDMIVHSK SISQNTAKEQ LSNKLETKSE NDTVCIDKMV 480 HITPHPECNF DEQRMPSAEP VQS*
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Functional Description ? help
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Source |
Description |
UniProt | Transcription factor. Binds to a 5'-CGTTGACCGAG-3' consensus core sequence which contains a W box, a frequently occurring elicitor-responsive cis-acting element. {ECO:0000269|PubMed:8972846}. |
Regulation -- Description ? help
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Source |
Description |
UniProt | INDUCTION: By salicylic acid (SA). {ECO:0000269|PubMed:17264121}. |