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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
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| TF ID |
Thecc1EG002071t1 |
| Common Name | TCM_002071 |
| Organism |
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| Taxonomic ID |
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| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Theobroma
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| Family |
G2-like |
| Protein Properties |
Length: 274aa MW: 30934 Da PI: 6.6022 |
| Description |
G2-like family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Thecc1EG002071t1 | genome | CGD | View CDS |
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| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | G2-like | 107.1 | 9.4e-34 | 30 | 84 | 1 | 55 |
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55
kprlrWt eLHerFveav+qLGG++kAtPktil++m+vkgLtl+h+kSHLQk+Rl
Thecc1EG002071t1 30 KPRLRWTVELHERFVEAVTQLGGPDKATPKTILKIMGVKGLTLYHLKSHLQKFRL 84
79****************************************************8 PP
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| Sequence ? help Back to Top |
| Protein Sequence Length: 274 aa
Download sequence Send
to blast |
MFHSKKPTFN TYDRTCVQGD SGLVLTTDPK PRLRWTVELH ERFVEAVTQL GGPDKATPKT 60
ILKIMGVKGL TLYHLKSHLQ KFRLGRQPQK DFNDQSVSDS RKVSEFYFSK TATGIRACCL 120
SDQSVQQTGG VRLQMEGGGI LNEELEVQKH LQMRIDAQGK YMQTILEKAA AQTLSEENTN 180
SQCYKYFGIQ KYGNMGSMNN LDFVSHVNVP SLEELHSIPA SETAHMEKQW KKLNIENLEN 240
PIVFWSDDLL PENIVIATAD YNSDGDSFKD DHL*
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| 3D Structure ? help Back to Top |
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| PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
| 6j4k_A | 7e-22 | 30 | 86 | 2 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j4k_B | 7e-22 | 30 | 86 | 2 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j4r_A | 9e-22 | 30 | 86 | 1 | 57 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j4r_B | 9e-22 | 30 | 86 | 1 | 57 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j4r_C | 9e-22 | 30 | 86 | 1 | 57 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j4r_D | 9e-22 | 30 | 86 | 1 | 57 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j5b_A | 7e-22 | 30 | 86 | 2 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j5b_C | 7e-22 | 30 | 86 | 2 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j5b_D | 7e-22 | 30 | 86 | 2 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j5b_F | 7e-22 | 30 | 86 | 2 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j5b_H | 7e-22 | 30 | 86 | 2 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j5b_J | 7e-22 | 30 | 86 | 2 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| Search in ModeBase |
| Functional Description ? help
Back to Top |
| Source |
Description |
| UniProt | Transcription factor required for phloem identity. Has a dual role both in promoting phloem differentiation and in repressing xylem differentiation during vascular development. Regulates the expression of the transcription factor NAC045 (AC A4VCM0). May activate the transcription of specific genes involved in phosphate uptake or assimilation (PubMed:15592750). Promotes flowering through transcriptional activation of both FT and its transport machinery component, FTIP1 (PubMed:26239308). {ECO:0000269|PubMed:14614507, ECO:0000269|PubMed:18523061, ECO:0000269|PubMed:25081480, ECO:0000269|PubMed:26239308, ECO:0000305|PubMed:15592750}. |
| Regulation -- Description ? help
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| Source |
Description |
| UniProt | INDUCTION: Up-regulated by phosphate deficiency. {ECO:0000269|PubMed:15592750}. |
| Publications
? help Back to Top |
- Motamayor JC, et al.
The genome sequence of the most widely cultivated cacao type and its use to identify candidate genes regulating pod color.
Genome Biol., 2013. 14(6): p. r53
[PMID:23731509] - Martínez-Navarro AC,Galván-Gordillo SV,Xoconostle-Cázares B,Ruiz-Medrano R
Vascular gene expression: a hypothesis.
Front Plant Sci, 2013. 4: p. 261
[PMID:23882276] - Ding Y, et al.
Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
BMC Plant Biol., 2013. 13: p. 229
[PMID:24377444] - Kondo Y, et al.
Vascular Cell Induction Culture System Using Arabidopsis Leaves (VISUAL) Reveals the Sequential Differentiation of Sieve Element-Like Cells.
Plant Cell, 2016. 28(6): p. 1250-62
[PMID:27194709] - Shibuta M,Abe M
FE Controls the Transcription of Downstream Flowering Regulators Through Two Distinct Mechanisms in Leaf Phloem Companion Cells.
Plant Cell Physiol., 2017. 58(11): p. 2017-2025
[PMID:29036620]
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