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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Thecc1EG001212t2 |
Common Name | TCM_001212 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Theobroma
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Family |
bZIP |
Protein Properties |
Length: 340aa MW: 38274.3 Da PI: 6.5199 |
Description |
bZIP family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Thecc1EG001212t2 | genome | CGD | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | bZIP_1 | 34.6 | 4.3e-11 | 101 | 140 | 3 | 42 |
XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
bZIP_1 3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeN 42
+k +rr+++NReAAr+sR+RKka++++Le+ +L +
Thecc1EG001212t2 101 TDKIQRRLAQNREAARKSRLRKKAYVQQLENSRLKLVQLE 140
7899**************************9766665555 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0042742 | Biological Process | defense response to bacterium |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
GO:0044212 | Molecular Function | transcription regulatory region DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 340 aa
Download sequence Send
to blast |
DSKAFKCLPY QFNYAKSASI VISRIMNSPS TQFVHSRRMG IYEPIHQIGM WGENFKSNGN 60 PNTSASVIVE VDTKLENESE TASHEMLAPS NKYDQEATKP TDKIQRRLAQ NREAARKSRL 120 RKKAYVQQLE NSRLKLVQLE QELERARQQG LYVGGGLEGS HLGFSGAVNS GIAAFEMEYG 180 HWMEEQNRQI CELRTALNAH ISDVELRILV ESGMSHYFEL FRMKSTASKA DVFYVMSGMW 240 KTSAERFFSW IGGFRPSELL KVLVPQLEPL TEQQFLEVCN LKQSCQQAED ALSQGMEKLQ 300 ETVSATVAAG QLGEGSYIPQ VATAMEKLEA LVSFVNQADH
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Functional Description ? help
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Source |
Description |
UniProt | Transcriptional activator that binds specifically to the DNA sequence 5'-TGACG-3'. Recognizes ocs elements like the as-1 motif of the cauliflower mosaic virus 35S promoter. Binding to the as-1-like cis elements mediate auxin- and salicylic acid-inducible transcription. May be involved in the induction of the systemic acquired resistance (SAR) via its interaction with NPR1. Could also bind to the Hex-motif (5'-TGACGTGG-3') another cis-acting element found in plant histone promoters. |
Publications
? help Back to Top |
- Duarte JM, et al.
Expression pattern shifts following duplication indicative of subfunctionalization and neofunctionalization in regulatory genes of Arabidopsis. Mol. Biol. Evol., 2006. 23(2): p. 469-78 [PMID:16280546] - Motamayor JC, et al.
The genome sequence of the most widely cultivated cacao type and its use to identify candidate genes regulating pod color. Genome Biol., 2013. 14(6): p. r53 [PMID:23731509] - Ding Y, et al.
Four distinct types of dehydration stress memory genes in Arabidopsis thaliana. BMC Plant Biol., 2013. 13: p. 229 [PMID:24377444] - Herrera-Vásquez A, et al.
Transcriptional Control of Glutaredoxin GRXC9 Expression by a Salicylic Acid-Dependent and NPR1-Independent Pathway in Arabidopsis. Plant Mol. Biol. Rep., 2018. [PMID:26696694] - Gutsche N,Zachgo S
The N-Terminus of the Floral Arabidopsis TGA Transcription Factor PERIANTHIA Mediates Redox-Sensitive DNA-Binding. PLoS ONE, 2016. 11(4): p. e0153810 [PMID:27128442] - Sun T, et al.
TGACG-BINDING FACTOR 1 (TGA1) and TGA4 regulate salicylic acid and pipecolic acid biosynthesis by modulating the expression of SYSTEMIC ACQUIRED RESISTANCE DEFICIENT 1 (SARD1) and CALMODULIN-BINDING PROTEIN 60g (CBP60g). New Phytol., 2018. 217(1): p. 344-354 [PMID:28898429]
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