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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Thecc1EG000680t4 |
Common Name | TCM_000680 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Theobroma
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Family |
WRKY |
Protein Properties |
Length: 313aa MW: 34451.9 Da PI: 10.3213 |
Description |
WRKY family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Thecc1EG000680t4 | genome | CGD | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | WRKY | 32.3 | 2e-10 | 277 | 296 | 3 | 22 |
-SS-EEEEEEE--TT-SS-E CS
WRKY 3 DgynWrKYGqKevkgsefpr 22
D y+WrKYGqK++kgs++pr
Thecc1EG000680t4 277 DDYSWRKYGQKPIKGSPHPR 296
99*****************9 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0005634 | Cellular Component | nucleus |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0005516 | Molecular Function | calmodulin binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
GO:0044212 | Molecular Function | transcription regulatory region DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 313 aa
Download sequence Send
to blast |
MAVELMMSYR NSNSFTTKME ENAVQEAASG LESVEKLIRL LSQTQQQQQQ NITNQEKYQS 60 SSSSTRSSLD LDMDCKAAAD VAVSKFKKVI SLLGRTRTGH ARFRRAPVAP PAATNTTTIS 120 PPVSQNQANQ ELETKVYYAT PIQQIPPPVT YHTHHHQDFL TVKSGVLERK DSSTTINFSY 180 SSAGNSFMSS LTGDTDSKQP SSSSAFQITN LSQVSSAGKP PLSSSSFKRK CSSENLGSGK 240 CSGSSGRCHC SKKRKLRSKR VVRVPAISLK MADIPPDDYS WRKYGQKPIK GSPHPRYMIF 300 HAIFYIFVSF LS*
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | KF313494 | 0.0 | KF313494.1 Firmiana danxiaensis microsatellite a837_SSR37 sequence. |