![]() |
PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | Thecc1EG000451t1 | ||||||||
Common Name | TCM_000451 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Theobroma
|
||||||||
Family | BES1 | ||||||||
Protein Properties | Length: 321aa MW: 34367.5 Da PI: 8.9305 | ||||||||
Description | BES1 family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF822 | 221.6 | 1.7e-68 | 3 | 147 | 1 | 149 |
DUF822 1 ggsgrkptwkErEnnkrRERrRRaiaakiyaGLRaqGnyklpkraDnneVlkALcreAGwvvedDGttyrkgskpleeaeaagssasaspess 93 g++gr ptwkErEnnkrRERrRRaiaakiy+GLRaqGnyklpk++DnneVlkALc+eAGw+ve+DGttyrkg+kp+ +e ag+s+++s +ss Thecc1EG000451t1 3 GAAGRLPTWKERENNKRRERRRRAIAAKIYTGLRAQGNYKLPKHCDNNEVLKALCAEAGWIVEEDGTTYRKGCKPP-LSELAGASTNISACSS 94 689*************************************************************************.9*************** PP DUF822 94 lqsslkssalaspvesysaspksssfpspssldsislasaasllpvlsvlslvsss 149 +q s++ss+++spv+sy+asp+ss psp+++d +++ + llp+l++ ++++++ Thecc1EG000451t1 95 IQPSPQSSSFPSPVPSYHASPSSSLCPSPTRFDANPS---TYLLPFLRNIAAIPNN 147 ***********************************88...5999999999888776 PP |
Protein Features ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF05687 | 3.2E-64 | 5 | 128 | IPR008540 | BES1/BZR1 plant transcription factor, N-terminal |
Gene Ontology ? help Back to Top | ||||||
---|---|---|---|---|---|---|
GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 321 aa Download sequence Send to blast |
MTGAAGRLPT WKERENNKRR ERRRRAIAAK IYTGLRAQGN YKLPKHCDNN EVLKALCAEA 60 GWIVEEDGTT YRKGCKPPLS ELAGASTNIS ACSSIQPSPQ SSSFPSPVPS YHASPSSSLC 120 PSPTRFDANP STYLLPFLRN IAAIPNNLPP LRISNSAPVT PPLSSPTSRG SKPKADWESL 180 SNGSLNSCRH PLFATSAPSS PTRRHHKTPA TIPECDESDA STVDSGRWVS FQTVASTAAA 240 AVAAPPSPTF NLVKRVVQQN PLQDGVTGHG GVTWGTVTEI GRGSEFEFEN GRVKPWEGER 300 IHEIGVDDLE LTLGTSKTCA * |
3D Structure ? help Back to Top | ||||||
---|---|---|---|---|---|---|
PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
5zd4_A | 3e-29 | 7 | 87 | 372 | 452 | Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1 |
5zd4_B | 3e-29 | 7 | 87 | 372 | 452 | Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1 |
5zd4_C | 3e-29 | 7 | 87 | 372 | 452 | Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1 |
5zd4_D | 3e-29 | 7 | 87 | 372 | 452 | Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1 |
Search in ModeBase |
Regulation -- PlantRegMap ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Nucleotide ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Source | Hit ID | E-value | Description | |||
GenBank | KF313471 | 0.0 | KF313471.1 Firmiana danxiaensis microsatellite a4587_SSR8 sequence. |
Annotation -- Protein ? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-value | Description | ||||
Refseq | XP_007047018.2 | 0.0 | PREDICTED: BES1/BZR1 homolog protein 2 | ||||
Swissprot | Q94A43 | 1e-118 | BEH2_ARATH; BES1/BZR1 homolog protein 2 | ||||
TrEMBL | A0A061DFW6 | 0.0 | A0A061DFW6_THECC; Brassinosteroid signaling positive regulator family protein isoform 1 | ||||
STRING | EOX91174 | 0.0 | (Theobroma cacao) |
Orthologous Group ? help Back to Top | |||
---|---|---|---|
Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Malvids | OGEM11512 | 23 | 33 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT1G75080.2 | 5e-91 | BES1 family protein |
Link Out ? help Back to Top | |
---|---|
Phytozome | Thecc1EG000451t1 |
Entrez Gene | 18610987 |
Publications ? help Back to Top | |||
---|---|---|---|
|